RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 DDIASQ8IXT1 998 aa15.24■□□□□ 0.03
SEMA3B-203ENST00000419007 HASPINQ8TF76 798 aa15.24■□□□□ 0.03
SEMA3B-203ENST00000419007 ENTPD7Q9NQZ7 604 aa15.24■□□□□ 0.03
SEMA3B-203ENST00000419007 A0A0J9YVX5 310 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 IQCA1LA6NCM1 817 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 MAGEB3O15480 346 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 MAFKO60675 156 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 ATP6V1B2P21281 511 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 DNAJB13P59910 316 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 CDC42EP1Q00587 391 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 PRKCQQ04759 706 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 VPS26BQ4G0F5 336 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 TTC33Q6PID6 262 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 CARM1Q86X55 608 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 ARHGAP12Q8IWW6 846 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 CCDC126Q96EE4 140 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 SMARCD1Q96GM5 515 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 SLC45A3Q96JT2 553 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 C3orf30Q96M34 536 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 OR51F1A6NGY5 319 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 UBFD1O14562 309 aaKnown RBP15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 CLIC3O95833 236 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 RPS6KA2Q15349 733 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 PM20D1Q6GTS8 502 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 SHCBP1Q8NEM2 672 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 MIPOL1Q8TD10 442 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 MYLPFQ96A32 169 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 HSPBAP1Q96EW2 488 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 MRGPRX2Q96LB1 330 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 PAAF1Q9BRP4 392 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 KATNBL1Q9H079 304 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 CLK4Q9HAZ1 481 aaKnown RBP15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 SMIM35A0A1B0GVV1 85 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 PAGE1O75459 146 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 RBP1P09455 135 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 AXLP30530 894 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 STT3AP46977 705 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 KCNC1P48547 511 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 LHX1P48742 406 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 PFKPQ01813 784 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 LPIN1Q14693 890 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 USP41Q3LFD5 358 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 HECTD2Q5U5R9 776 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 FIBCD1Q8N539 461 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 OR2T34Q8NGX1 318 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 OR2T3Q8NH03 318 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 CYGBQ8WWM9 190 aa15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 PGAP3Q96FM1 320 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 FCRL2Q96LA5 508 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-203ENST00000419007 TRIP12Q14669 1992 aaPredicted RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 A0A0J9YYE9 177 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 TCRBV3S1A0A5B6 114 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 PPP6CO00743 305 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 MATN3O15232 486 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 CHRM3P20309 590 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 ESRRGP62508 458 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 TRAP1Q12931 704 aaKnown RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 FBXO48Q5FWF7 155 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 USP50Q70EL3 339 aaPredicted RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 TFAP2DQ7Z6R9 452 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 PCYOX1LQ8NBM8 494 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 C3orf58Q8NDZ4 430 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 PABPC5Q96DU9 382 aaKnown RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 C19orf60Q96EN9 201 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 RPL10LQ96L21 214 aaKnown RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 NT5MQ9NPB1 228 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 PADI4Q9UM07 663 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 SIX3O95343 332 aaPredicted RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 CASP2P42575 452 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 BORAQ6PGQ7 559 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 RETREG3Q86VR2 466 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 DPF3Q92784 378 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 TREX1Q9NSU2 369 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 RRN3Q9NYV6 651 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 TMEM181Q9P2C4 612 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 CD300AQ9UGN4 299 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 VWA7Q9Y334 891 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 V9GYQ6 96 aa15.22■□□□□ 0.03
SEMA3B-203ENST00000419007 RBM47A0AV96 593 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 LRRC14BA6NHZ5 514 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 ANGPT2O15123 496 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 FOXD2O60548 495 aaPredicted RBP15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 CAPNS1P04632 268 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 POLD2P49005 469 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 CDK9P50750 372 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 PSMD5Q16401 504 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 GPR141Q7Z602 305 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 SH3RF2Q8TEC5 729 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 TOP1MTQ969P6 601 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 TSGA13Q96PP4 275 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 KLHL5Q96PQ7 755 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 TCF12Q99081 682 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 GSTO2Q9H4Y5 243 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 AKTIPQ9H8T0 292 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 TTC3P53804 2025 aa15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 ALDOCP09972 364 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-203ENST00000419007 MFSD10Q14728 455 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms