RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SERPINB11Q96P15 392 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 XPO6Q96QU8 1125 aaKnown RBP5.03□□□□□ -1.6
VPS41-205ENST00000414632 ACOX2Q99424 681 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 TBCBQ99426 244 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 TPSD1Q9BZJ3 242 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 TTYH3Q9C0H2 523 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 HAUS4Q9H6D7 363 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 DDIT4Q9NX09 232 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 TAS2R14Q9NYV8 317 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 DEC1Q9P2X7 70 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 RAD54BQ9Y620 910 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 ZNF292O60281 2723 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 TP53BP1Q12888 1972 aaPredicted RBP5.03□□□□□ -1.6
VPS41-205ENST00000414632 ADAMTS9Q9P2N4 1935 aa5.03□□□□□ -1.6
VPS41-205ENST00000414632 NUP205Q92621 2012 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 DMXL1Q9Y485 3027 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PLXND1Q9Y4D7 1925 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 TCRBV5S2A0A599 114 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 WASH3PC4AMC7 463 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SGK1O00141 431 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 AP5Z1O43299 807 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CACNG3O60359 315 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 TBL1XO60907 577 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 NDUFS2O75306 463 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 APOL3O95236 402 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 ADCY5O95622 1261 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 LSM8O95777 96 aaKnown RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 IGLV3-25P01717 112 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 IGLV3-27P01718 113 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 APOEP02649 317 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CYP1A1P04798 512 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 CYBBP04839 570 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 LPLP06858 475 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CISD3P0C7P0 127 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 UNGP13051 313 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 TDGF1P13385 188 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 TACR2P21452 398 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 TNFAIP3P21580 790 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 MMP8P22894 467 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 HOXD9P28356 352 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 CASP14P31944 242 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CD70P32970 193 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CHKAP35790 457 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PLA2G5P39877 138 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PBX1P40424 430 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 MAGEA9P43362 315 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 NSFP46459 744 aaKnown RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 GABRB2P47870 512 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CXCL12P48061 93 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CCR3P51677 355 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 RPS24P62847 133 aaKnown RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 CDK17Q00537 523 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 DEUP1Q05D60 604 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PTP4A2Q12974 167 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 DMC1Q14565 340 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 GEN1Q17RS7 908 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 MSMPQ1L6U9 139 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 C15orf59Q2T9L4 293 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 MPPE1Q53F39 396 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 TDRD12Q587J7 1177 aaKnown RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 PITRM1Q5JRX3 1037 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 EFHC1Q5JVL4 640 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 ADGRF1Q5T601 910 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 C10orf62Q5T681 223 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 SFMBT2Q5VUG0 894 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 NUGGCQ68CJ6 796 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 ANO7Q6IWH7 933 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 C1orf228Q6PIY5 440 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SLC26A9Q7LBE3 791 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CHST15Q7LFX5 561 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 ZNF571Q7Z3V5 609 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 IRF2BP2Q7Z5L9 587 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CACUL1Q86Y37 369 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PHYKPLQ8IUZ5 450 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 UNC45BQ8IWX7 931 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 LGI2Q8N0V4 545 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CARNMT1Q8N4J0 409 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SPEM1Q8N4L4 309 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 OXR1Q8N573 874 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 ZNF366Q8N895 744 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 TERB1Q8NA31 727 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 NETO2Q8NC67 525 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 MSANTD4Q8NCY6 345 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 OLIG1Q8TAK6 271 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SORCS1Q8WY21 1168 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 EXOC4Q96A65 974 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 FOXRED1Q96CU9 486 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 RAX2Q96IS3 184 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 TUBGCP5Q96RT8 1024 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 NPY6RQ99463 290 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PRRX2Q99811 253 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 MAGEB5Q9BZ81 275 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CIPCQ9C0C6 399 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SIK2Q9H0K1 926 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SLC6A17Q9H1V8 727 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 PRMT8Q9NR22 394 aaPredicted RBP5.02□□□□□ -1.61
VPS41-205ENST00000414632 PIGVQ9NUD9 493 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms