RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ACOX1Q15067 660 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 GPR68Q15743 365 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 LEXMQ3ZCV2 418 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 TCEAL5Q5H9L2 206 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 CLLU1OSQ5K130 101 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 SPOUT1Q5T280 376 aaKnown RBP6.47□□□□□ -1.37
LSM5-203ENST00000409782 METRNLQ641Q3 311 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 NOTUMQ6P988 496 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 SYT13Q7L8C5 426 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 SLC15A3Q8IY34 581 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 FAM109AQ8N4B1 249 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 C4orf32Q8N8J7 132 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 COLGALT1Q8NBJ5 622 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 PIGOQ8TEQ8 1089 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 OVCA2Q8WZ82 227 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 PABPC5Q96DU9 382 aaKnown RBP6.47□□□□□ -1.37
LSM5-203ENST00000409782 LRIG1Q96JA1 1093 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 CASD1Q96PB1 797 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 OSBPL9Q96SU4 736 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 CWH43Q9H720 699 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 KCND3Q9UK17 655 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 USP22Q9UPT9 525 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 CNTNAP2Q9UHC6 1331 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 A0A1W2PS29 197 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 MBD3L5A6NJ08 208 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 SLC38A8A6NNN8 435 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 STX16-NPEPL1H3BU86 382 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 INO80B-WBP1J3KQ70 363 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 K7ESM1 405 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 STX16O14662 325 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 INPPL1O15357 1258 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 HNRNPRO43390 633 aaKnown RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 TSPAN1O60635 241 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 MFAP3LO75121 409 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 URI1O94763 535 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 SUN1O94901 812 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 SPATA31D3P0C874 917 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 CYP11B2P19099 503 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 CR2P20023 1033 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 KCNA5P22460 613 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 HOXD13P35453 343 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 CCT6AP40227 531 aaKnown RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 NAMPTP43490 491 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 PDE6CP51160 858 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 TFF2Q03403 129 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 MBTD1Q05BQ5 628 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 NCBP1Q09161 790 aaKnown RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 GALNT2Q10471 571 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 PDIA5Q14554 519 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 HLXQ14774 488 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 PTCHD3Q3KNS1 767 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 LIPMQ5VYY2 423 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 KRT79Q5XKE5 535 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 NAIF1Q69YI7 327 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 MSANTD2Q6P1R3 559 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 TMEM108Q6UXF1 575 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 SPATA31D4Q6ZUB0 917 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 HTR3DQ70Z44 454 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 B4GALNT4Q76KP1 1039 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 KRT74Q7RTS7 529 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 ZBTB8OSQ8IWT0 167 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 THNSL1Q8IYQ7 743 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 HACE1Q8IYU2 909 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 CNNM3Q8NE01 707 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 URGCPQ8TCY9 931 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 HMGB4Q8WW32 186 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 MRPS27Q92552 414 aaKnown RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 MARS2Q96GW9 593 aaKnown RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 ZNF558Q96NG5 402 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 CDCA3Q99618 268 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 C2orf40Q9H1Z8 148 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 GHITMQ9H3K2 345 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 MINDY3Q9H8M7 445 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 PLSCR4Q9NRQ2 329 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 KRT84Q9NSB2 600 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 PRMT7Q9NVM4 692 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 PPP1R14DQ9NXH3 145 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 VSX1Q9NZR4 365 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 STK39Q9UEW8 545 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 LRWD1Q9UFC0 647 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 CNOT11Q9UKZ1 510 aaKnown RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.46□□□□□ -1.38
LSM5-203ENST00000409782 PCDHB2Q9Y5E7 798 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 PHLPP2Q6ZVD8 1323 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 VCANP13611 3396 aa6.46□□□□□ -1.38
LSM5-203ENST00000409782 SPTBN5Q9NRC6 3674 aaKnown RBP6.45□□□□□ -1.38
LSM5-203ENST00000409782 REV3LO60673 3130 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.45□□□□□ -1.38
LSM5-203ENST00000409782 LRRIQ4A6NIV6 560 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 DIRC3C9JPN6 131 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 DOK2O60496 412 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 PTP4A3O75365 173 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 CER1O95813 267 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 ITGB3P05106 788 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 TNNT1P13805 278 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 HGFP14210 728 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 CHRM3P20309 590 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 DNAJB1P25685 340 aa6.45□□□□□ -1.38
LSM5-203ENST00000409782 HOXA11P31270 313 aaPredicted RBP6.45□□□□□ -1.38
LSM5-203ENST00000409782 ARL1P40616 181 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms