RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TAF2Q6P1X5 1199 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 APLFQ8IW19 511 aaPredicted RBP13.45□□□□□ -0.26
COL6A2-204ENST00000409416 KLHDC9Q8NEP7 349 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 CEP70Q8NHQ1 597 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 FAM81AQ8TBF8 368 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 CDK15Q96Q40 435 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 GBA3Q9H227 469 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 EFCAB1Q9HAE3 211 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 PSMD13Q9UNM6 376 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 LZTS1Q9Y250 596 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 DLX3O60479 287 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 ATP6V1G1O75348 118 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 LINC00032P0C843 101 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 ME2P23368 584 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 COG7P83436 770 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 PRKAA1Q13131 559 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 CEACAM7Q14002 265 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 ARHGAP18Q8N392 663 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 DRAXINQ8NBI3 349 aaPredicted RBP13.45□□□□□ -0.26
COL6A2-204ENST00000409416 NUDT8Q8WV74 236 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 EGFL8Q99944 293 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 MRPL1Q9BYD6 325 aaKnown RBP13.45□□□□□ -0.26
COL6A2-204ENST00000409416 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 CATSPERBQ9H7T0 1116 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 ADAM28Q9UKQ2 775 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 PTPRFP10586 1907 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 H0Y626 953 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 RAMP2O60895 175 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 TRIM16O95361 564 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 STAU1O95793 577 aaKnown RBP13.45□□□□□ -0.26
COL6A2-204ENST00000409416 OR1D2P34982 312 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 CD151P48509 253 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 SLC5A9Q2M3M2 681 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 SMYD5Q6GMV2 418 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 KLC3Q6P597 504 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 PGM2L1Q6PCE3 622 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 SNRNP27Q8WVK2 155 aaKnown RBP13.45□□□□□ -0.26
COL6A2-204ENST00000409416 PKP2Q99959 881 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 GLOD4Q9HC38 313 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 MID1IP1Q9NPA3 183 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 CNGB3Q9NQW8 809 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 EPS15L1Q9UBC2 864 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 STK39Q9UEW8 545 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 MATN2O00339 956 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 PRRG1O14668 218 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 FFAR3O14843 346 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 GPR42O15529 346 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 AKAP10O43572 662 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 CRTAMO95727 393 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 ARSDP51689 593 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 INTS6LQ5JSJ4 861 aaKnown RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 STXBP5Q5T5C0 1151 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 RGMBQ6NW40 437 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 ZC3HC1Q86WB0 502 aaKnown RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 SEPHS2Q99611 448 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 TLR5O60602 858 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 PAMP19021 973 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 CDK18Q07002 472 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 PAFAH1B3Q15102 231 aaKnown RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 ZBTB6Q15916 424 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 ZYG11AQ6WRX3 759 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 TMEM135Q86UB9 458 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 IFNLR1Q8IU57 520 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 TOP6BLQ8N6T0 577 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 HIC2Q96JB3 615 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 GORASP1Q9BQQ3 440 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 CAAP1Q9H8G2 361 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 WDR6Q9NNW5 1121 aaKnown RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 CASS4Q9NQ75 786 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 RCOR3Q9P2K3 495 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 CDH9Q9ULB4 789 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 SIP14410 1827 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 TMEM114B3SHH9 223 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 H3BNX3 289 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 NDUFS3O75489 264 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 CTGFP29279 349 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 STX1BP61266 288 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 KBTBD6Q86V97 674 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 TRIML2Q8N7C3 387 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 LINC01465Q8N7H1 131 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 DNAJB14Q8TBM8 379 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 TEKT5Q96M29 485 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 GPR62Q9BZJ7 368 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 RHOJQ9H4E5 214 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 OSER1Q9NX31 292 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 MARCH4Q9P2E8 410 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 HS3ST4Q9Y661 456 aa13.44□□□□□ -0.26
COL6A2-204ENST00000409416 COPG1Q9Y678 874 aaKnown RBP13.44□□□□□ -0.26
COL6A2-204ENST00000409416 WDR87Q6ZQQ6 2873 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF189O75820 626 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 SLC35E2BP0CK96 405 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 EFNA1P20827 205 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 KCNA5P22460 613 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 FCGRTP55899 365 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 DDX39BQ13838 428 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms