RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SLC47A1Q96FL8 570 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 TEKT5Q96M29 485 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 AGAP4Q96P64 663 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 PRKD2Q9BZL6 878 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 REEP1Q9H902 201 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SNX15Q9NRS6 342 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 DNAJB9Q9UBS3 223 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 PACSIN3Q9UKS6 424 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 MAB21L2Q9Y586 359 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 LYVE1Q9Y5Y7 322 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 HMX3A6NHT5 357 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SLITRK5O94991 958 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 ASNSP08243 561 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 XPAP23025 273 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 NDST2P52849 883 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CYP4F2P78329 520 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CYP4F3Q08477 520 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 OXA1LQ15070 435 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 TAF12Q16514 161 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 BTBD16Q32M84 506 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 ZNF470Q6ECI4 717 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 NOXA1Q86UR1 476 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CHERPQ8IWX8 916 aaKnown RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 MFSD2AQ8NA29 543 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CREB3L1Q96BA8 519 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 AP2M1Q96CW1 435 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CERS2Q96G23 380 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CATSPERZQ9NTU4 200 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CLN6Q9NWW5 311 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 MTMR4Q9NYA4 1195 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 TRPM5Q9NZQ8 1165 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CSADQ9Y600 493 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 B3GALNT1O75752 331 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SULT1C4O75897 302 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 FGRP09769 529 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 DHRS4L1P0CG22 281 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 RAP2AP10114 183 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 NR4A1P22736 598 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 HOXD13P35453 343 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 LEPRP48357 1165 aaKnown RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 DSTNP60981 165 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 TBC1D10BQ4KMP7 808 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SPAG16Q8N0X2 631 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 FAM149B1Q96BN6 582 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 HYLS1Q96M11 299 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 C12orf10Q9HB07 376 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SACM1LQ9NTJ5 587 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 ATP6AP2A0A1C7CYW4 349 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 KCNK1O00180 336 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CHRNA1P02708 482 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 YWHABP31946 246 aaKnown RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 NUP62P37198 522 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 NDST1P52848 882 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 GMFBP60983 142 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 FBXL19Q6PCT2 694 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CCBE1Q6UXH8 406 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 UNC5AQ6ZN44 842 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 BPHLQ86WA6 291 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 AMIGO1Q86WK6 493 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CLIP4Q8N3C7 705 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 HDAC10Q969S8 669 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SIPA1Q96FS4 1042 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 MED10Q9BTT4 135 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 POLR3BQ9NW08 1133 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SLC39A1Q9NY26 324 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 TAS2R9Q9NYW1 312 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 AKAP7Q9P0M2 348 aaPredicted RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 IKZF3Q9UKT9 509 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 CRYBG1Q9Y4K1 1723 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 SUPT3HB4E1H0 165 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 LRIG2O94898 1065 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 CETPP11597 493 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 EFNA5P52803 228 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 GEMP55040 296 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 YWHAZP63104 245 aaKnown RBP10□□□□□ -0.81
PTPRM-203ENST00000400060 CCDC58Q4VC31 144 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 BHLHB9Q6PI77 547 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 SPESP1Q6UW49 350 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 GK5Q6ZS86 529 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 CARM1Q86X55 608 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 SPPL2CQ8IUH8 684 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 SLC44A2Q8IWA5 706 aaPredicted RBP10□□□□□ -0.81
PTPRM-203ENST00000400060 CHPFQ8IZ52 775 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 TRPV3Q8NET8 790 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 OR5K1Q8NHB7 308 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 CD101Q93033 1021 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 CGRRF1Q99675 332 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 TTYH1Q9H313 450 aaPredicted RBP10□□□□□ -0.81
PTPRM-203ENST00000400060 MAN1C1Q9NR34 630 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 ACTR3BQ9P1U1 418 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
PTPRM-203ENST00000400060 ITGALP20701 1170 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 FGFR2P21802 821 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 MATN1P21941 496 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 SREBF1P36956 1147 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 TGFBR2P37173 567 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 ETFBP38117 255 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 S100A12P80511 92 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 CDC20Q12834 499 aa10□□□□□ -0.81
PTPRM-203ENST00000400060 FASTKD3Q14CZ7 662 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms