RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CD70P32970 193 aa15.23■□□□□ 0.03
COL25A1-201ENST00000399126 CRHR1P34998 444 aa15.23■□□□□ 0.03
COL25A1-201ENST00000399126 SPRP35270 261 aaPredicted RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 SPRED3Q2MJR0 410 aa15.23■□□□□ 0.03
COL25A1-201ENST00000399126 C10orf62Q5T681 223 aaPredicted RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 LDB1Q86U70 411 aaPredicted RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 ZC3HC1Q86WB0 502 aaKnown RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 OR6K2Q8NGY2 324 aa15.23■□□□□ 0.03
COL25A1-201ENST00000399126 USP13Q92995 863 aaPredicted RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 FEM1CQ96JP0 617 aa15.23■□□□□ 0.03
COL25A1-201ENST00000399126 MRM3Q9HC36 420 aaKnown RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 UTP6Q9NYH9 597 aaKnown RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 YBX2Q9Y2T7 364 aaKnown RBP15.23■□□□□ 0.03
COL25A1-201ENST00000399126 SPO11Q9Y5K1 396 aa15.23■□□□□ 0.03
COL25A1-201ENST00000399126 TYW5A2RUC4 315 aaKnown RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 SMAD6O43541 496 aaKnown RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 PRLP01236 227 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 PTPN2P17706 415 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 AVPR1AP37288 418 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 DBN1Q16643 649 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 N4BP2L1Q5TBK1 243 aaPredicted RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 PARP9Q8IXQ6 854 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 BBS5Q8N3I7 341 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 C12orf76Q8N812 135 aaPredicted RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 CCDC197Q8NCU1 140 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 PTCD2Q8WV60 388 aaKnown RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 TM6SF2Q9BZW4 377 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 NSRP1Q9H0G5 558 aaKnown RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 SCUBE2Q9NQ36 999 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 SLC39A10Q9ULF5 831 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 ARHGAP26Q9UNA1 814 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 PRUNE2Q8WUY3 3088 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 MROH6A6NGR9 719 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 SLC4A1P02730 911 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 RPSAP08865 295 aaKnown RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 EPHA5P54756 1037 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 OVGP1Q12889 678 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 LMAN2Q12907 356 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 ZNF460Q14592 562 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 RGS9BPQ6ZS82 235 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 ARHGAP22Q7Z5H3 698 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 CCDC63Q8NA47 563 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 OR13C4Q8NGS5 318 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 MTIF3Q9H2K0 278 aaKnown RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 MANSC1Q9H8J5 431 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 ZNF395Q9H8N7 513 aaPredicted RBP15.22■□□□□ 0.03
COL25A1-201ENST00000399126 SLC40A1Q9NP59 571 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 LHX3Q9UBR4 397 aa15.22■□□□□ 0.03
COL25A1-201ENST00000399126 HGSO14964 777 aaPredicted RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 PHGDHO43175 533 aaKnown RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 GSRP00390 522 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 UBE3AQ05086 875 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 OTOAQ7RTW8 1153 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 PTAR1Q7Z6K3 402 aaPredicted RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 SDCCAG8Q86SQ7 713 aaPredicted RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 TMEM25Q86YD3 366 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 CNTN4Q8IWV2 1026 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 PDCD6IPQ8WUM4 868 aaKnown RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 DNAJC1Q96KC8 554 aaKnown RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 TDRD1Q9BXT4 1180 aaKnown RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 LINC00597Q9H2U6 94 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 PIF1Q9H611 641 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 FBXO6Q9NRD1 293 aaPredicted RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 TMEM216Q9P0N5 145 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 INTS6Q9UL03 887 aaKnown RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 EDF1O60869 148 aaKnown RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 HAUS5O94927 633 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 MAGEA12P43365 314 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 ROR2Q01974 943 aaKnown RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 TRAF2Q12933 501 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 USP4Q13107 963 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 NEPROQ6NW34 567 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 SLC41A1Q8IVJ1 513 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 ST13P5Q8NFI4 369 aaPredicted RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 HDAC10Q969S8 669 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 RANBP9Q96S59 729 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 PRKD2Q9BZL6 878 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 MARCH4Q9P2E8 410 aaPredicted RBP15.21■□□□□ 0.03
COL25A1-201ENST00000399126 RWDD3Q9Y3V2 267 aa15.21■□□□□ 0.03
COL25A1-201ENST00000399126 DNAJC6O75061 913 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 FGF1P05230 155 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 HLA-DPA1P20036 260 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 GKP32189 559 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 CTSOP43234 321 aaPredicted RBP15.2■□□□□ 0.02
COL25A1-201ENST00000399126 SERPINB8P50452 374 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 CSE1LP55060 971 aaKnown RBP15.2■□□□□ 0.02
COL25A1-201ENST00000399126 GPM6BQ13491 265 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 THOC5Q13769 683 aaKnown RBP15.2■□□□□ 0.02
COL25A1-201ENST00000399126 RFTN1Q14699 578 aaPredicted RBP15.2■□□□□ 0.02
COL25A1-201ENST00000399126 FYB2Q5VWT5 728 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 ZCCHC23Q6ZST2 131 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 CPXM2Q8N436 756 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 LPCAT1Q8NF37 534 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 OR6P1Q8NGX9 317 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 ZNF707Q96C28 371 aaPredicted RBP15.2■□□□□ 0.02
COL25A1-201ENST00000399126 RMDN1Q96DB5 314 aa15.2■□□□□ 0.02
COL25A1-201ENST00000399126 RPL10LQ96L21 214 aaKnown RBP15.2■□□□□ 0.02
COL25A1-201ENST00000399126 TBATAQ96M53 351 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms