RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 C1QTNF8P60827 252 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 CLLU1OSQ5K130 101 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 RARS2Q5T160 578 aaKnown RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 FAM45BPQ6NSW5 357 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 RGMBQ6NW40 437 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 TMEM207Q6UWW9 146 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 RPS27LQ71UM5 84 aaKnown RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 LDB1Q86U70 411 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 RTN4RL1Q86UN2 441 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 ST13P4Q8IZP2 240 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 RNF148Q8N7C7 305 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 HMGCLL1Q8TB92 370 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 FAM45AQ8TCE6 357 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 PHF21BQ96EK2 531 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 DCUN1D1Q96GG9 259 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 TRMOQ9BU70 441 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 MRPL1Q9BYD6 325 aaKnown RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 ARHGAP39Q9C0H5 1083 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 GSTO2Q9H4Y5 243 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 PIDD1Q9HB75 910 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 MARCH4Q9P2E8 410 aaPredicted RBP12.36□□□□□ -0.43
RFC5-201ENST00000392542 RIMS3Q9UJD0 308 aa12.36□□□□□ -0.43
RFC5-201ENST00000392542 FAM92AA1XBS5 289 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 CAPN8A6NHC0 703 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 DRGXA6NNA5 263 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 CCL22O00626 93 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 ACOT8O14734 319 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 UBDO15205 165 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 LDB2O43679 373 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 RAMP2O60895 175 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 TBX18O95935 607 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 PENKP01210 267 aaPredicted RBP12.35□□□□□ -0.43
RFC5-201ENST00000392542 IMPDH1P20839 514 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 FCGRTP55899 365 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 PSME3P61289 254 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 STX5Q13190 355 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 GRM2Q14416 872 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 POLD3Q15054 466 aaPredicted RBP12.35□□□□□ -0.43
RFC5-201ENST00000392542 PDK3Q15120 406 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
RFC5-201ENST00000392542 GPR158Q5T848 1215 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 CATSPER1Q8NEC5 780 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 FBXO32Q969P5 355 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 ALG9Q9H6U8 611 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 OLA1Q9NTK5 396 aaKnown RBP12.35□□□□□ -0.43
RFC5-201ENST00000392542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.35□□□□□ -0.43
RFC5-201ENST00000392542 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
RFC5-201ENST00000392542 KCTD3Q9Y597 815 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 PRSS51A0A1B0GVH4 220 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 OR51F1A6NGY5 319 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 TXNDC9O14530 226 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 ARSAP15289 507 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 YWHAQP27348 245 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 ETFBP38117 255 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 FLT3LGP49771 235 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 FOLH1Q04609 750 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 ACVR1Q04771 509 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 ILF2Q12905 390 aaKnown RBP12.35□□□□□ -0.43
RFC5-201ENST00000392542 SERINC3Q13530 473 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 PTK2BQ14289 1009 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 FASTKQ14296 549 aaKnown RBP12.35□□□□□ -0.43
RFC5-201ENST00000392542 PARP15Q460N3 678 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 FBXL19Q6PCT2 694 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 PIP4K2CQ8TBX8 421 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 L3HYPDHQ96EM0 354 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 TRAF6Q9Y4K3 522 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 PCDHGA7Q9Y5G6 932 aa12.35□□□□□ -0.43
RFC5-201ENST00000392542 PSMD12O00232 456 aaPredicted RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 SYN3O14994 580 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 SLC10A3P09131 477 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 CST5P28325 142 aaPredicted RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 CCND3P30281 292 aaPredicted RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 PBX3P40426 434 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 PSMD8P48556 350 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 NFKB2Q00653 900 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 ZNF678Q5SXM1 525 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 NAIF1Q69YI7 327 aaPredicted RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 REP15Q6BDI9 236 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 SLC24A5Q71RS6 500 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 ISCA2Q86U28 154 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 PIM3Q86V86 326 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 CIR1Q86X95 450 aaPredicted RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 MIB1Q86YT6 1006 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 TICAM1Q8IUC6 712 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 GPR152Q8TDT2 470 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 LINC01599Q8WXQ3 324 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 TBATAQ96M53 351 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 RPRD1AQ96P16 312 aaPredicted RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 SEMA3CQ99985 751 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 POLR1EQ9GZS1 481 aaKnown RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 COPS7BQ9H9Q2 264 aaPredicted RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 MRPL40Q9NQ50 206 aaKnown RBP12.34□□□□□ -0.43
RFC5-201ENST00000392542 CACNA2D2Q9NY47 1150 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 MARCH2Q9P0N8 246 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms