RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ZNF574Q6ZN55 896 aaPredicted RBP17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 DNAAF5Q86Y56 855 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 RTL3Q8N8U3 475 aaKnown RBP17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 OR56A4Q8NGH8 313 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 CASKIN2Q8WXE0 1202 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 FUBP1Q96AE4 644 aaKnown RBP17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 TUBGCP2Q9BSJ2 902 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 SLC25A18Q9H1K4 315 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 SUV39H2Q9H5I1 410 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 CYP4F12Q9HCS2 524 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 AKAP7Q9P0M2 348 aaPredicted RBP17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 KIAA1468Q9P260 1216 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 UBA2Q9UBT2 640 aaPredicted RBP17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 APPL1Q9UKG1 709 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 MFHAS1Q9Y4C4 1052 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 A8MX80 341 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 F8VZ95 297 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 TEX33O43247 280 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 CCL4P13236 92 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 UCHL3P15374 230 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 ALDH4A1P30038 563 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 MMP12P39900 470 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 OR1D5P58170 312 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 CYTH1Q15438 398 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 EFHC2Q5JST6 749 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 MIIPQ5JXC2 388 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 TMEM164Q5U3C3 297 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 ARCQ7LC44 396 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 STRADAQ7RTN6 431 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 SLFN11Q7Z7L1 901 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 ZSWIM9Q86XI8 627 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 CAMK1DQ8IU85 385 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 SLITRK4Q8IW52 837 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 FAM114A1Q8IWE2 563 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 TMEM159Q96B96 161 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 FUCA2Q9BTY2 467 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 RETREG1Q9H6L5 497 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 ATP8A1Q9Y2Q0 1164 aa17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 UBR5O95071 2799 aaPredicted RBP17.88■□□□□ 0.45
PDLIM4-202ENST00000379018 A0A1W2PQC6 194 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 BUB1BO60566 1050 aaPredicted RBP17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 RECQL5O94762 991 aaPredicted RBP17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 PTPN9P43378 593 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 SUOXP51687 545 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 BIRC2Q13490 618 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 SERINC3Q13530 473 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 HLTFQ14527 1009 aaKnown RBP eCLIP17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 SKIDA1Q1XH10 827 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 INO80DQ53TQ3 878 aaPredicted RBP17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 PIM3Q86V86 326 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 PMEPA1Q969W9 287 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 NUDT22Q9BRQ3 303 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 SELENOOQ9BVL4 669 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 ZMYND15Q9H091 742 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 DGKBQ9Y6T7 804 aa17.87■□□□□ 0.45
PDLIM4-202ENST00000379018 BSNQ9UPA5 3926 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 RHPN2P1A8MT19 583 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 ELFN1P0C7U0 828 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 KRT3P12035 628 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 GPD1P21695 349 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 MMP8P22894 467 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 PPM1FP49593 454 aaPredicted RBP17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 ATP1A2P50993 1020 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 KIAA1024LP59773 190 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 DTX1Q86Y01 620 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 IL22RA1Q8N6P7 574 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 CELF6Q96J87 481 aaKnown RBP17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 SEMA3CQ99985 751 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 LGR4Q9BXB1 951 aa17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 NAA15Q9BXJ9 866 aaKnown RBP17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 GEMIN8Q9NWZ8 242 aaKnown RBP17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 NOCTQ9UK39 431 aaKnown RBP17.86■□□□□ 0.45
PDLIM4-202ENST00000379018 TSPAN11A1L157 253 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 STMND1H3BQB6 276 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 J3KR12 359 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 NUDT21O43809 227 aaKnown RBP17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 CPNE6O95741 557 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 PNLIPP16233 465 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 KELP23276 732 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 CD82P27701 267 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 RFC1P35251 1148 aaPredicted RBP17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 RGRP47804 291 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 B4GALNT1Q00973 533 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 FMO1Q01740 532 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 CDR2Q01850 454 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 RALGDSQ12967 914 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 GRM3Q14832 879 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 ACOX1Q15067 660 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 PARP15Q460N3 678 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 SMYD5Q6GMV2 418 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 BRAT1Q6PJG6 821 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 OGFOD3Q6PK18 319 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 KIAA1524Q8TCG1 905 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 NTAN1Q96AB6 310 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 CCDC74BQ96LY2 380 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 STK33Q9BYT3 514 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 WDR26Q9H7D7 661 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 CATSPERBQ9H7T0 1116 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 CARS2Q9HA77 564 aaKnown RBP17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 SEPT11Q9NVA2 429 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms