RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 TMEM135Q86UB9 458 aa17.55■□□□□ 0.4
H2AFX-201ENST00000375167 RYBPQ8N488 228 aaPredicted RBP17.55■□□□□ 0.4
H2AFX-201ENST00000375167 LURAP1Q96LR2 239 aa17.55■□□□□ 0.4
H2AFX-201ENST00000375167 WRAP53Q9BUR4 548 aaKnown RBP17.55■□□□□ 0.4
H2AFX-201ENST00000375167 MFRPQ9BY79 579 aa17.55■□□□□ 0.4
H2AFX-201ENST00000375167 TWSG1Q9GZX9 223 aa17.55■□□□□ 0.4
H2AFX-201ENST00000375167 KIAA1468Q9P260 1216 aa17.55■□□□□ 0.4
H2AFX-201ENST00000375167 HECAQ9UBI9 543 aaPredicted RBP17.55■□□□□ 0.4
H2AFX-201ENST00000375167 PCDHGA9Q9Y5G4 932 aaKnown RBP17.55■□□□□ 0.4
H2AFX-201ENST00000375167 ANKRD36A6QL64 1941 aa17.55■□□□□ 0.4
H2AFX-201ENST00000375167 PCSK5Q92824 1860 aa17.55■□□□□ 0.4
H2AFX-201ENST00000375167 DNHD1Q96M86 4753 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 SYNJ2BP-COX16A0A087WUM0 186 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 BMP6P22004 513 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 GGCXP38435 758 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 SEMA5AQ13591 1074 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 CUL2Q13617 745 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 INPP5AQ14642 412 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 LRRC73Q5JTD7 316 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 NKAIN2Q5VXU1 208 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 KCTD16Q68DU8 428 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 JMJD6Q6NYC1 403 aaPredicted RBP17.54■□□□□ 0.4
H2AFX-201ENST00000375167 GDF7Q7Z4P5 450 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 SETD3Q86TU7 594 aaPredicted RBP17.54■□□□□ 0.4
H2AFX-201ENST00000375167 FAM186BQ8IYM0 893 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 OR1E3Q8WZA6 343 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 DHTKD1Q96HY7 919 aaPredicted RBP17.54■□□□□ 0.4
H2AFX-201ENST00000375167 TSG101Q99816 390 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 TRIM55Q9BYV6 548 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 TM6SF2Q9BZW4 377 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 TMEM168Q9H0V1 697 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 CLSTN2Q9H4D0 955 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 POPDC2Q9HBU9 364 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 ST7Q9NRC1 585 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 DDIT4Q9NX09 232 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 COX16Q9P0S2 106 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 TMEM9Q9P0T7 183 aa17.54■□□□□ 0.4
H2AFX-201ENST00000375167 A0A0D9SEW6 157 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 BIN1O00499 593 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 PSMA7O14818 248 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 CBX6O95503 412 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 UGT2B4P06133 528 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 TIMP2P16035 220 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 PER3P56645 1201 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 PITX1P78337 314 aaPredicted RBP17.53■□□□□ 0.4
H2AFX-201ENST00000375167 LRRC63Q05C16 580 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 SLC20A2Q08357 652 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 SQSTM1Q13501 440 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 STILQ15468 1287 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 WSCD2Q2TBF2 565 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 TMEM71Q6P5X7 295 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 TTC7BQ86TV6 843 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 OR56A4Q8NGH8 313 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 OR6K2Q8NGY2 324 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 TFAP2BQ92481 460 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 FBXO8Q9NRD0 319 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 CROTQ9UKG9 612 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 HS3ST4Q9Y661 456 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 IGHV1OR21-1A0A087WYE8 117 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 ANKUB1A6NFN9 424 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 KATNA1O75449 491 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 MBD3O95983 291 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 PAEPP09466 180 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 CD44P16070 742 aaKnown RBP17.53■□□□□ 0.4
H2AFX-201ENST00000375167 GKP32189 559 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 PSMC2P35998 433 aaKnown RBP17.53■□□□□ 0.4
H2AFX-201ENST00000375167 CNGA2Q16280 664 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 ANKRD40Q6AI12 368 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 FOXR2Q6PJQ5 311 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 C17orf82Q86X59 251 aaPredicted RBP17.53■□□□□ 0.4
H2AFX-201ENST00000375167 Q8NA96 180 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 ZDHHC1Q8WTX9 485 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 SPON2Q9BUD6 331 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 OSBPL1AQ9BXW6 950 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 FGF22Q9HCT0 170 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 FCF1Q9Y324 198 aaKnown RBP17.53■□□□□ 0.4
H2AFX-201ENST00000375167 ZNF451Q9Y4E5 1061 aa17.53■□□□□ 0.4
H2AFX-201ENST00000375167 PPP1R3GB7ZBB8 358 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 CACNB4O00305 520 aaPredicted RBP17.52■□□□□ 0.39
H2AFX-201ENST00000375167 KRIT1O00522 736 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 CETN3O15182 167 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 DPM1O60762 260 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 KELP23276 732 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 PPM1FP49593 454 aaPredicted RBP17.52■□□□□ 0.39
H2AFX-201ENST00000375167 PMS1P54277 932 aaKnown RBP17.52■□□□□ 0.39
H2AFX-201ENST00000375167 YWHAZP63104 245 aaKnown RBP17.52■□□□□ 0.39
H2AFX-201ENST00000375167 CDK17Q00537 523 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 FKBP3Q00688 224 aaKnown RBP17.52■□□□□ 0.39
H2AFX-201ENST00000375167 MTM1Q13496 603 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 EIF4EBP2Q13542 120 aaPredicted RBP17.52■□□□□ 0.39
H2AFX-201ENST00000375167 C5orf22Q49AR2 442 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 OR7D4Q8NG98 312 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 CCL4L1Q8NHW4 92 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 KLHL32Q96NJ5 620 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 NUP62CLQ9H1M0 184 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 APMAPQ9HDC9 416 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 COQ6Q9Y2Z9 468 aa17.52■□□□□ 0.39
H2AFX-201ENST00000375167 ANKHD1Q8IWZ3 2542 aaKnown RBP17.51■□□□□ 0.39
H2AFX-201ENST00000375167 PIPSLA2A3N6 862 aa17.51■□□□□ 0.39
H2AFX-201ENST00000375167 PRSS44E7EML9 344 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms