RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 KLHL32Q96NJ5 620 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 OSBPL6Q9BZF3 934 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 PRSS16Q9NQE7 514 aa20.76■□□□□ 0.91
SHISA4-201ENST00000362011 NDRG2Q9UN36 371 aaKnown RBP20.76■□□□□ 0.91
SHISA4-201ENST00000362011 RPL26L1Q9UNX3 145 aaKnown RBP20.76■□□□□ 0.91
SHISA4-201ENST00000362011 KANSL1LA0AUZ9 987 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 ANKRD66B4E2M5 251 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 LEFTY1O75610 366 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 KLF8O95600 359 aaPredicted RBP20.75■□□□□ 0.91
SHISA4-201ENST00000362011 CTSLP07711 333 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 CD72P21854 359 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 CRADDP78560 199 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 QPCTQ16769 361 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 ARMC3Q5W041 872 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 DENND2CQ68D51 928 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 DSG4Q86SJ6 1040 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 CCNJLQ8IV13 435 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 PALM2Q8IXS6 379 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 KIAA2013Q8IYS2 634 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 PPHLN1Q8NEY8 458 aaKnown RBP20.75■□□□□ 0.91
SHISA4-201ENST00000362011 ECHDC3Q96DC8 303 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 EBNA1BP2Q99848 306 aaKnown RBP20.75■□□□□ 0.91
SHISA4-201ENST00000362011 WDR83Q9BRX9 315 aaKnown RBP20.75■□□□□ 0.91
SHISA4-201ENST00000362011 NAT9Q9BTE0 207 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 DLL3Q9NYJ7 618 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 PHTF1Q9UMS5 762 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 MRPS17Q9Y2R5 130 aaKnown RBP20.75■□□□□ 0.91
SHISA4-201ENST00000362011 FRYLO94915 3013 aa20.75■□□□□ 0.91
SHISA4-201ENST00000362011 CAMK2GQ13555 558 aaPredicted RBP20.74■□□□□ 0.91
SHISA4-201ENST00000362011 CCINQ13939 588 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 POU6F1Q14863 301 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 KYNUQ16719 465 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 HSF5Q4G112 596 aaPredicted RBP20.74■□□□□ 0.91
SHISA4-201ENST00000362011 PCID2Q5JVF3 399 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 IGDCC3Q8IVU1 814 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 NDUFAF2Q8N183 169 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 IL17RCQ8NAC3 791 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 TMIEQ8NEW7 156 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 PIH1D2Q8WWB5 315 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 CFAP36Q96G28 342 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 RANBP9Q96S59 729 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 GABRG3Q99928 467 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 PABPC3Q9H361 631 aaKnown RBP20.74■□□□□ 0.91
SHISA4-201ENST00000362011 ZC3H7BQ9UGR2 993 aaKnown RBP20.74■□□□□ 0.91
SHISA4-201ENST00000362011 FBXO4Q9UKT5 387 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 SOX13Q9UN79 622 aa20.74■□□□□ 0.91
SHISA4-201ENST00000362011 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.74■□□□□ 0.91
SHISA4-201ENST00000362011 CACNA1IQ9P0X4 2223 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 MED19A0JLT2 244 aaPredicted RBP20.73■□□□□ 0.91
SHISA4-201ENST00000362011 TSPAN11A1L157 253 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 MAGEB16A2A368 324 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 C1QTNF3-AMACRE9PGA6 284 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 SYNCRIPO60506 623 aaKnown RBP20.73■□□□□ 0.91
SHISA4-201ENST00000362011 RNF40O75150 1001 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 TTC4O95801 387 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 TSHRP16473 764 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 PGAM1P18669 254 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 ADRA1DP25100 572 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 HSD17B3P37058 310 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 SEPT6Q14141 434 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 PUM1Q14671 1186 aaKnown RBP eCLIP20.73■□□□□ 0.91
SHISA4-201ENST00000362011 STARD3Q14849 445 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 ZNF805Q5CZA5 627 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 BRAT1Q6PJG6 821 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 TXNDC5Q8NBS9 432 aaKnown RBP20.73■□□□□ 0.91
SHISA4-201ENST00000362011 PIP4K2CQ8TBX8 421 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 BLOC1S5Q8TDH9 187 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 HCAR2Q8TDS4 363 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 PTCD2Q8WV60 388 aaKnown RBP20.73■□□□□ 0.91
SHISA4-201ENST00000362011 FAM129BQ96TA1 746 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 MRM3Q9HC36 420 aaKnown RBP20.73■□□□□ 0.91
SHISA4-201ENST00000362011 TCAF1Q9Y4C2 921 aa20.73■□□□□ 0.91
SHISA4-201ENST00000362011 HEATR9A2RTY3 570 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 RIPK2O43353 540 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 ACSL3O95573 720 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 GSTA2P09210 222 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 HOXB2P14652 356 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 POLR2LP62875 67 aaKnown RBP20.72■□□□□ 0.91
SHISA4-201ENST00000362011 MSLNQ13421 630 aaPredicted RBP20.72■□□□□ 0.91
SHISA4-201ENST00000362011 LAMB3Q13751 1172 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 LRRC32Q14392 662 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 UAP1Q16222 522 aaPredicted RBP20.72■□□□□ 0.91
SHISA4-201ENST00000362011 EOGTQ5NDL2 527 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 DGLUCYQ7Z3D6 616 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 ZSWIM9Q86XI8 627 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 RPLP0P6Q8NHW5 317 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 SPOCK2Q92563 424 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 NELL1Q92832 810 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 SRPK1Q96SB4 655 aaKnown RBP20.72■□□□□ 0.91
SHISA4-201ENST00000362011 KIFC1Q9BW19 673 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 VPS37BQ9H9H4 285 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 FBRSQ9HAH7 460 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 HACD3Q9P035 362 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 DKK3Q9UBP4 350 aa20.72■□□□□ 0.91
SHISA4-201ENST00000362011 A0A0J9YYE9 177 aa20.71■□□□□ 0.91
SHISA4-201ENST00000362011 FAM237BA0A1B0GVD1 139 aa20.71■□□□□ 0.91
SHISA4-201ENST00000362011 KPNA3O00505 521 aaPredicted RBP20.71■□□□□ 0.91
SHISA4-201ENST00000362011 SPAG6O75602 509 aa20.71■□□□□ 0.91
SHISA4-201ENST00000362011 TRBC1P01850 177 aa20.71■□□□□ 0.91
SHISA4-201ENST00000362011 PRKCGP05129 697 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms