RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 WNT10BO00744 389 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 SLC9A3R1O14745 358 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 PAPSS1O43252 624 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 TMCC2O75069 709 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 GSTT1P30711 240 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 MC4RP32245 332 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 MED22Q15528 200 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 CES5AQ6NT32 575 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 PIGKQ92643 395 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 PURBQ96QR8 312 aaKnown RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 TTLL2Q9BWV7 592 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 OTCP00480 354 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 RNF43Q68DV7 783 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 FBXO42Q6P3S6 717 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 UNC93AQ86WB7 457 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 EPS8L1Q8TE68 723 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 AVILO75366 819 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 PTDSS1P48651 473 aaKnown RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 ABATP80404 500 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 CAMK1Q14012 370 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 TAF8Q7Z7C8 310 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 ZNF557Q8N988 423 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 GLIS3Q8NEA6 775 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 AGAP11Q8TF27 550 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 BAP1Q92560 729 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 ZHX1-C8orf76Q96EF9 292 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 SUCOQ9UBS9 1254 aaKnown RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 ZFPM1Q8IX07 1006 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 ZNF483Q8TF39 744 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 RCN3Q96D15 328 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 RNF157Q96PX1 679 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 SMIM11AP58511 58 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 DCTN2Q13561 401 aaKnown RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 LIPMQ5VYY2 423 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 TTC23Q5W5X9 447 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 CD101Q93033 1021 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 FRMD6Q96NE9 622 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 OR52E6Q96RD3 313 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 ZBTB46Q86UZ6 589 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 IQCF2Q8IXL9 164 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 DAW1Q8N136 415 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 CDADC1Q9BWV3 514 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 DSN1Q9H410 356 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 EGFL7Q9UHF1 273 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 CLEC4AQ9UMR7 237 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 TBC1D30Q9Y2I9 924 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 NAT16Q8N8M0 369 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 ZNF248Q8NDW4 579 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 ZNF563Q8TA94 476 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 VANGL1Q8TAA9 524 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 MECRQ9BV79 373 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 BHLHE41Q9C0J9 482 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 C2CD2Q9Y426 696 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 G3V2T6 193 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 CPSF6Q16630 551 aaKnown RBP eCLIP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 TXNDC11Q6PKC3 985 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 CXCL17Q6UXB2 119 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 RBM44Q6ZP01 1051 aaKnown RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 DHDDSQ86SQ9 333 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 KBTBD8Q8NFY9 601 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 PIH1D2Q8WWB5 315 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 EMID1Q96A84 441 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 C3orf18Q9UK00 162 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 MRPS23Q9Y3D9 190 aaKnown RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 RFXANKO14593 260 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 FSBPO95073 299 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 EPHA3P29320 983 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 RPL3P39023 403 aaKnown RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 CCL23P55773 120 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 C2orf73Q8N5S3 287 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 SSR3Q9UNL2 185 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 NELFEP18615 380 aaKnown RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 AUHQ13825 339 aaKnown RBP18.43■□□□□ 0.54
SHANK1-202ENST00000359082 PJA1Q8NG27 643 aa18.43■□□□□ 0.54
SHANK1-202ENST00000359082 TOP3BO95985 862 aaKnown RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ITGA2BP08514 1039 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 CYP2C18P33260 490 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 POMZP3Q6PJE2 187 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 OR4L1Q8NH43 312 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 LGMNQ99538 433 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 NPAS2Q99743 824 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 SNX15Q9NRS6 342 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ZMYM2Q9UBW7 1377 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 NRCAMQ92823 1304 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ITGAVP06756 1048 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ITGB3BPQ13352 177 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 NOMO2Q5JPE7 1267 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 C1orf186Q6ZWK4 172 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 STX12Q86Y82 276 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 LMAN2LQ9H0V9 348 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 RNPEPL1Q9HAU8 725 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 MSRAQ9UJ68 235 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 GGA2Q9UJY4 613 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-202ENST00000359082 STX16-NPEPL1H3BU86 382 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 STX16O14662 325 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 S100GP29377 79 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 ACLYP53396 1101 aa18.42■□□□□ 0.54
SHANK1-202ENST00000359082 AMER2Q8N7J2 671 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms