RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 NAV1Q8NEY1 1877 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 SLC31A1O15431 190 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 INSIG1O15503 277 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 USP1O94782 785 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 TNNI3P19429 210 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 OLIG2Q13516 323 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 DPYSL2Q16555 572 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 LRRC23Q53EV4 343 aaPredicted RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 C1orf220Q5T0J3 134 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 WDR48Q8TAF3 677 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 ZNF461Q8TAF7 563 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 SEPHS2Q99611 448 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 SLC25A51Q9H1U9 297 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 SLC17A6Q9P2U8 582 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 TLR6Q9Y2C9 796 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 C5orf60A6NFR6 353 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 ABHD2P08910 425 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 NUDT17P0C025 328 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 ALADP13716 330 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 NCALDP61601 193 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 SLC10A7Q0GE19 358 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 TBL3Q12788 808 aaKnown RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 ZNF460Q14592 562 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 DLG2Q15700 870 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 METTL3Q86U44 580 aaKnown RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 KLHL23Q8NBE8 558 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 CEP70Q8NHQ1 597 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 INPP5DQ92835 1189 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 IGSF21Q96ID5 467 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 TLR9Q9NR96 1032 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 CHCHD3Q9NX63 227 aaKnown RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 PSMD12O00232 456 aaPredicted RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 PRAMEF1O95521 474 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 NQO1P15559 274 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 CALB2P22676 271 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 ATP5F1P24539 256 aaPredicted RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 PTP4A2Q12974 167 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 USP4Q13107 963 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 GPR17Q13304 367 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 CYP2R1Q6VVX0 501 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 DENND6AQ8IWF6 608 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 PLD4Q96BZ4 506 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 MYLK2Q9H1R3 596 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 MRGBPQ9NV56 204 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 GNEQ9Y223 722 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 J3KR12 359 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 MLNP12872 115 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 HTR1BP28222 390 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 EPHA3P29320 983 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 TRMT10BQ6PF06 316 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 CAMK1DQ8IU85 385 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 RBFAQ8N0V3 343 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 C2orf15Q8WU43 125 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 COL26A1Q96A83 441 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 FAM120BQ96EK7 910 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 TBCDQ9BTW9 1192 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 ZNF556Q9HAH1 456 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 TMEM63AO94886 807 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 NTRK1P04629 796 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 RPN2P04844 631 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 AP5B1Q2VPB7 878 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 TRABD2AQ86V40 505 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 MREGQ8N565 214 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 PCDH20Q8N6Y1 951 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 PIWIL2Q8TC59 973 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 FIG4Q92562 907 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 C1orf50Q9BV19 199 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 TRIM4Q9C037 500 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 FAM124BQ9H5Z6 455 aaPredicted RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 FKBPLQ9UIM3 349 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 SLC12A4Q9UP95 1085 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 HS3ST4Q9Y661 456 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 IGKV6-21A0A0C4DH24 114 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 H0Y858 1186 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 PCCBP05166 539 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 EEF1DP29692 281 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 ADGRF1Q5T601 910 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 GLIS1Q8NBF1 620 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 CKAP2Q8WWK9 683 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 ATXN2LQ8WWM7 1075 aaKnown RBP13.75□□□□□ -0.21
SMC6-201ENST00000351948 AP2M1Q96CW1 435 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 SPACA7Q96KW9 195 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 RXFP1Q9HBX9 757 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
SMC6-201ENST00000351948 TCRBV7S3A2A0A539 114 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 NPEPPSL1A6NEC2 478 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 OR51F1A6NGY5 319 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 ANKDD1BA6NHY2 528 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 ISM1B1AKI9 464 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 INPPL1O15357 1258 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 RPP40O75818 363 aaKnown RBP13.74□□□□□ -0.21
SMC6-201ENST00000351948 ZNF23P17027 643 aa13.74□□□□□ -0.21
SMC6-201ENST00000351948 HOXB8P17481 243 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms