RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PTMAP06454 111 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 TGM2P21980 687 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 KELP23276 732 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 VIPR1P32241 457 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 DAB2P98082 770 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 PPIDQ08752 370 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 MTM1Q13496 603 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 AGERQ15109 404 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 CCDC157Q569K6 752 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 MFSD7Q6UXD7 560 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 LIPIQ6XZB0 460 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 SPOCD1Q6ZMY3 1216 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 KATNAL2Q8IYT4 538 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 SYCE1Q8N0S2 351 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 PLD5Q8N7P1 536 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 BAHD1Q8TBE0 780 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 ADAMTS14Q8WXS8 1223 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 P3H4Q92791 437 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 VOPP1Q96AW1 172 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 DUSP23Q9BVJ7 150 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 SLC13A1Q9BZW2 595 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 SEPT10Q9P0V9 454 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 COQ6Q9Y2Z9 468 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 TTC24A2A3L6 582 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 C3orf70A6NLC5 250 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 CACNB4O00305 520 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 CST8O60676 142 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 PIAS2O75928 621 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 RECQL5O94762 991 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 CSF2P04141 144 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 C1SP09871 688 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 JUNDP17535 347 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 DGKAP23743 735 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 IGFALSP35858 605 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 COPS2P61201 443 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 IFI35P80217 286 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 PPARDQ03181 441 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 SLC10A2Q12908 348 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 TRAF2Q12933 501 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 FZD2Q14332 565 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 IRF4Q15306 451 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 SHBQ15464 509 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 WSCD2Q2TBF2 565 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 FAXCQ5TGI0 409 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 CCDC70Q6NSX1 233 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 MACC1Q6ZN28 852 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 ZSWIM9Q86XI8 627 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 SLC22A18ASQ8N1D0 253 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 GALNT15Q8N3T1 639 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 TP53I13Q8NBR0 393 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 EXD1Q8NHP7 514 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 SCRN2Q96FV2 425 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 LGMNQ99538 433 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 SCNM1Q9BWG6 230 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 ADGRE3Q9BY15 652 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 NCKIPSDQ9NZQ3 722 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 SPASTQ9UBP0 616 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 B4GALT6Q9UBX8 382 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 DOLKQ9UPQ8 538 aa15.83■□□□□ 0.12
TSPAN4-201ENST00000346501 TP53BP1Q12888 1972 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 DCHS1Q96JQ0 3298 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 CCDC66A2RUB6 948 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 A8MX80 341 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 KCNK1O00180 336 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 PSMD11O00231 422 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 HYAL3O43820 417 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 PCCBP05166 539 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 ATXN1LP0C7T5 689 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 CTSEP14091 401 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 NME1P15531 152 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 CTNNA2P26232 953 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 CDKN2BP42772 138 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 DUSP3P51452 185 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 RPL26P61254 145 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 DSC2Q02487 901 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 ZNF211Q13398 564 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 INPP5AQ14642 412 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 ZNF542PQ5EBM4 170 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 DENND2CQ68D51 928 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 ALG1LQ6GMV1 187 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 RAD9BQ6WBX8 426 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 CHCHD4Q8N4Q1 142 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 TFB1MQ8WVM0 346 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 SCG3Q8WXD2 468 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 GLMNQ92990 594 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 IL12RB2Q99665 862 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 APOOQ9BUR5 198 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 GOLPH3Q9H4A6 298 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 MBNL1Q9NR56 388 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 GPR27Q9NS67 375 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 NLGN3Q9NZ94 848 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 APOBEC3BQ9UH17 382 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 RPL26L1Q9UNX3 145 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 TFR2Q9UP52 801 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 NEUROG3Q9Y4Z2 214 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 PCDHGA1Q9Y5H4 931 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 CSNK1G3Q9Y6M4 447 aa15.82■□□□□ 0.12
TSPAN4-201ENST00000346501 ANKRD36A6QL64 1941 aa15.81■□□□□ 0.12
TSPAN4-201ENST00000346501 SCAMP1O15126 338 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms