RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 IGLV3-10A0A075B6K4 115 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 A0A0D9SEW6 157 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 TMEM189-UBE2V1I3L0A0 370 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 LDB2O43679 373 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 PRSS56P0CW18 603 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 KCNC1P48547 511 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 AQP4P55087 323 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 MRPS22P82650 360 aaKnown RBP14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 GRAMD1BQ3KR37 738 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 FAM156AQ8NDB6 213 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 GABPB2Q8TAK5 448 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC24A3Q9HC58 644 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 FNIP2Q9P278 1114 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 MTMR11A4FU01 709 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 MROH6A6NGR9 719 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 TRPC5OSA6NMA1 111 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 H3BNX3 289 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 TLR5O60602 858 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 TRPA1O75762 1119 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 S1PR4O95977 384 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 GOT2P00505 430 aaKnown RBP14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 DNAJB13P59910 316 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 FLOT2Q14254 428 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 TEX26Q8N6G2 289 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 EXOC2Q96KP1 924 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 RANBP9Q96S59 729 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 SERPINI1Q99574 410 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 POLR1EQ9GZS1 481 aaKnown RBP14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 MFSD1Q9H3U5 465 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 STK39Q9UEW8 545 aa14.95□□□□□ -0.02
VIPAS39-202ENST00000343765 ATP6AP2A0A1C7CYW4 349 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 SYN3O14994 580 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC7A4O43246 635 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 ATP6AP2O75787 350 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 SUPT7LO94864 414 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 HDCP19113 662 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 MAGEA11P43364 429 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 TM4SF4P48230 202 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 IL10RBQ08334 325 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 CEACAM7Q14002 265 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 RNF220Q5VTB9 566 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 KBTBD6Q86V97 674 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 PHC3Q8NDX5 983 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 CEP70Q8NHQ1 597 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 SPON2Q9BUD6 331 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 KLHL4Q9C0H6 718 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 DOCK4Q8N1I0 1966 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 VWA8A3KMH1 1905 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 MAGEA13PA6NCF6 341 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 RBP1P09455 135 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 RTP2Q5QGT7 225 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 ADGRG6Q86SQ4 1221 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 SETD3Q86TU7 594 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 TMEM173Q86WV6 379 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 PDSS2Q86YH6 399 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 OR7D4Q8NG98 312 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 GATA6Q92908 595 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 UBXN10Q96LJ8 280 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 TRPC7Q9HCX4 862 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 PRPF19Q9UMS4 504 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 SQORQ9Y6N5 450 aa14.94□□□□□ -0.02
VIPAS39-202ENST00000343765 CCDC162PA2VCL2 907 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 TXNDC9O14530 226 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 RTN3O95197 1032 aaPredicted RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 PAPSS2O95340 614 aaPredicted RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 VNN2O95498 520 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 TACR2P21452 398 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 CDH13P55290 713 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 FAM189BP81408 668 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 SEMA3AQ14563 771 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 ACAP2Q15057 778 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 ZNF423Q2M1K9 1284 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 PARP15Q460N3 678 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 PRSS55Q6UWB4 352 aaPredicted RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 PCDH20Q8N6Y1 951 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 SPPL2BQ8TCT7 592 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 PTERQ96BW5 349 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 NACA2Q9H009 215 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 EFCAB1Q9HAE3 211 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 OLA1Q9NTK5 396 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 ADA2Q9NZK5 511 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 CCDC167Q9P0B6 97 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 LOC285095A0A1B0GVY8 99 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 UBFD1O14562 309 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 RNASEH1O60930 286 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 GLP2RO95838 553 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC11A1P49279 550 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 MS4A2Q01362 244 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 PIGGQ5H8A4 983 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 ZNF549Q6P9A3 640 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 TAS1R1Q7RTX1 841 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 BHLHE22Q8NFJ8 381 aaPredicted RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 SMIM14Q96QK8 99 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 TUBGCP5Q96RT8 1024 aa14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 EML4Q9HC35 981 aaKnown RBP14.93□□□□□ -0.02
VIPAS39-202ENST00000343765 FNDC3AQ9Y2H6 1198 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms