RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SOCS5O75159 536 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 ZNF821O75541 412 aaPredicted RBP17.43■□□□□ 0.38
CLDN4-201ENST00000340958 PGLSO95336 258 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 PAPSS2O95340 614 aaPredicted RBP17.43■□□□□ 0.38
CLDN4-201ENST00000340958 POP4O95707 220 aaKnown RBP17.43■□□□□ 0.38
CLDN4-201ENST00000340958 C1QAP02745 245 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 SNRPAP09012 282 aaKnown RBP17.43■□□□□ 0.38
CLDN4-201ENST00000340958 ABL2P42684 1182 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 CCNHP51946 323 aaPredicted RBP17.43■□□□□ 0.38
CLDN4-201ENST00000340958 DPY19L3Q6ZPD9 716 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 ETFBKMTQ8IXQ9 262 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 GJD3Q8N144 294 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 PTPRN2Q92932 1015 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 MTBPQ96DY7 904 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 AGAP2Q99490 1192 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 CPNE1Q99829 537 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 TREX1Q9NSU2 369 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 NSMCE4AQ9NXX6 385 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 ACTL7BQ9Y614 415 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 NUMBLQ9Y6R0 609 aa17.43■□□□□ 0.38
CLDN4-201ENST00000340958 TTC34A8MYJ7 566 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 TRIM49D1C9J1S8 452 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 TIMM44O43615 452 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 BUD23O43709 281 aaKnown RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 PRLP01236 227 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 SRPRAP08240 638 aaKnown RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 KRT4P19013 534 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 CNTFP26441 200 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 GP5P40197 560 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 GRIA4P48058 902 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 GRM3Q14832 879 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 QPCTQ16769 361 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 PREPLQ4J6C6 727 aaPredicted RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 FNDC3BQ53EP0 1204 aaKnown RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 TEDDM1Q5T9Z0 273 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 GRTP1Q5TC63 336 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 MROH9Q5TGP6 573 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 KIAA0930Q6ICG6 404 aaPredicted RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 PACS1Q6VY07 963 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 NDUFAF2Q8N183 169 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 C4orf33Q8N1A6 199 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 UCMAQ8WVF2 138 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 TUBGCP5Q96RT8 1024 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 FAM167BQ9BTA0 163 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 RPP25Q9BUL9 199 aaKnown RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 BRD9Q9H8M2 597 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 KCTD3Q9Y597 815 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 A0A1W2PPM1 405 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 MROH6A6NGR9 719 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 LOC730098B7Z3J9 87 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 CTPS1P17812 591 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 GJA4P35212 333 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 PDE1BQ01064 536 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 BMPR2Q13873 1038 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 TAF1AQ15573 450 aaPredicted RBP17.42■□□□□ 0.38
CLDN4-201ENST00000340958 ITPRIPL2Q3MIP1 535 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 NUDT18Q6ZVK8 323 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 CSGALNACT1Q8TDX6 532 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 NKIRAS1Q9NYS0 192 aa17.42■□□□□ 0.38
CLDN4-201ENST00000340958 GOLGA8RI6L899 631 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 DLL1O00548 723 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 LDB2O43679 373 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 RPL26P61254 145 aaKnown RBP17.41■□□□□ 0.38
CLDN4-201ENST00000340958 MSLNQ13421 630 aaPredicted RBP17.41■□□□□ 0.38
CLDN4-201ENST00000340958 SEPT7Q16181 437 aaKnown RBP17.41■□□□□ 0.38
CLDN4-201ENST00000340958 TTC19Q6DKK2 380 aaPredicted RBP17.41■□□□□ 0.38
CLDN4-201ENST00000340958 ANKRD42Q8N9B4 389 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 GRIN3AQ8TCU5 1115 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 CALML6Q8TD86 181 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 STYXQ8WUJ0 223 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 HDAC10Q969S8 669 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 NXPE3Q969Y0 559 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 ATXN7L3BQ96GX2 97 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 KLF6Q99612 283 aaPredicted RBP17.41■□□□□ 0.38
CLDN4-201ENST00000340958 CAPS2Q9BXY5 557 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 GPR63Q9BZJ6 419 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 HACD3Q9P035 362 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 EPS15L1Q9UBC2 864 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 RPL26L1Q9UNX3 145 aaKnown RBP17.41■□□□□ 0.38
CLDN4-201ENST00000340958 SPO11Q9Y5K1 396 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 PSAT1Q9Y617 370 aa17.41■□□□□ 0.38
CLDN4-201ENST00000340958 MYO10Q9HD67 2058 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 TMEM120BA0PK00 339 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 C2CD4DB7Z1M9 353 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 PRRT4C9JH25 899 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 SPAG7O75391 227 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 CREB1P16220 341 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 SPRP35270 261 aaPredicted RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 EIF4HQ15056 248 aaKnown RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 UGP2Q16851 508 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 PTAR1Q7Z6K3 402 aaPredicted RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 TERB1Q8NA31 727 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 OR13J1Q8NGT2 312 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 MGARPQ8TDB4 240 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 DNAJC1Q96KC8 554 aaKnown RBP17.4■□□□□ 0.38
CLDN4-201ENST00000340958 MRGPRX3Q96LB0 322 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 SUV39H2Q9H5I1 410 aa17.4■□□□□ 0.38
CLDN4-201ENST00000340958 CCL22O00626 93 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms