RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 KELP23276 732 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 NFKBIAP25963 317 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 MIPP30301 263 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 HCAR3P49019 387 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 SCNN1BP51168 640 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 TMPRSS3P57727 454 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 SRP54P61011 504 aaKnown RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 TLE3Q04726 772 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 IL10RBQ08334 325 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 KLHL30Q0D2K2 578 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 SPIDRQ14159 915 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 WSCD2Q2TBF2 565 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ANO6Q4KMQ2 910 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 SLC35F3Q8IY50 421 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 LZTR1Q8N653 840 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ARL10Q8N8L6 244 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 LSM14AQ8ND56 463 aaKnown RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 OR6C4Q8NGE1 309 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 KCNE4Q8WWG9 221 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ATXN7L3BQ96GX2 97 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 WDR92Q96MX6 357 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 BBC3Q96PG8 261 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 CCDC3Q9BQI4 270 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 BPIFA3Q9BQP9 254 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 SNRNP25Q9BV90 132 aaKnown RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 CLPBQ9H078 707 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 HSD3B7Q9H2F3 369 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 PDFQ9HBH1 243 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 AIPL1Q9NZN9 384 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 SIRPGQ9P1W8 387 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 MYO1AQ9UBC5 1043 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 KLQ9UEF7 1012 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 CNOT8Q9UFF9 292 aaKnown RBP10.73□□□□□ -0.69
CAPN3-202ENST00000337571 GPR34Q9UPC5 381 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ATP8A1Q9Y2Q0 1164 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 OR1A2Q9Y585 309 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ATRXP46100 2492 aa10.73□□□□□ -0.69
CAPN3-202ENST00000337571 ANKRD36A6QL64 1941 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 LRRK1Q38SD2 2015 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-202ENST00000337571 A0A1W2PQ67 120 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 A8MX80 341 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 H3BRJ5 948 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 PDE2AO00408 941 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-202ENST00000337571 ATXN7O15265 892 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-202ENST00000337571 ELFN1P0C7U0 828 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 MYBL1P10243 752 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 ARL4AP40617 200 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 TPM4P67936 248 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 MTM1Q13496 603 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 ACOX1Q15067 660 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 AGERQ15109 404 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 TCEA2Q15560 299 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 CA9Q16790 459 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 ALG11Q2TAA5 492 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 BOLA3Q53S33 107 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 PERM1Q5SV97 790 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 TMCO4Q5TGY1 634 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 BBS5Q8N3I7 341 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 WDR36Q8NI36 951 aaKnown RBP10.72□□□□□ -0.69
CAPN3-202ENST00000337571 FNIP1Q8TF40 1166 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 NSMCE1Q8WV22 266 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF653Q96CK0 615 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 HIC2Q96JB3 615 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 SLC46A1Q96NT5 459 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 KCTD15Q96SI1 283 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-202ENST00000337571 STRADBQ9C0K7 418 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 SEPT3Q9UH03 358 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 MOSPD1Q9UJG1 213 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 PCDHGA8Q9Y5G5 932 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 ENTPD2Q9Y5L3 495 aa10.72□□□□□ -0.69
CAPN3-202ENST00000337571 BAHCC1Q9P281 2608 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 A0A1W2PQC6 194 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 TNFSF15O95150 251 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 PRKCGP05129 697 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 MMP12P39900 470 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 PRKCIP41743 596 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF165P49910 485 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 AP1S1P61966 158 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF235Q14590 738 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 LBRQ14739 615 aaKnown RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 TAF1BQ53T94 588 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 AFMIDQ63HM1 303 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 IGF2-ASQ6U949 168 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 TMCO3Q6UWJ1 677 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 TAF8Q7Z7C8 310 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 FAM46DQ8NEK8 389 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 OR56A4Q8NGH8 313 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 PCDH19Q8TAB3 1148 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 PDCD6IPQ8WUM4 868 aaKnown RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF599Q96NL3 588 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 PSKH2Q96QS6 385 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 GFM1Q96RP9 751 aaKnown RBP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 SYT11Q9BT88 431 aa10.71□□□□□ -0.69
CAPN3-202ENST00000337571 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.71□□□□□ -0.69
CAPN3-202ENST00000337571 KCTD5Q9NXV2 234 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms