RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SMYD5Q6GMV2 418 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 GDF6Q6KF10 455 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 C4orf22Q6V702 233 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 LRRTM3Q86VH5 581 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 CLVS1Q8IUQ0 354 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 RELL1Q8IUW5 271 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 FBXO39Q8N4B4 442 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 FAM47BQ8NA70 645 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 METTL6Q8TCB7 284 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 RAET1EQ8TD07 263 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 NMRK2Q9NPI5 230 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 EURLQ9NYK6 297 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 ZNF180Q9UJW8 692 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 BAG5Q9UL15 447 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 POLR2AP24928 1970 aaKnown RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 TRPC5OSA6NMA1 111 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 E7ENX8 843 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 BIRC5O15392 142 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 HNRNPRO43390 633 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 SYNCRIPO60506 623 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 LRATO95237 230 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 SERPINF2P08697 491 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 ADSLP30566 484 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 HARS2P49590 506 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 CASP9P55211 416 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 MRPS6P82932 125 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 CTC1Q2NKJ3 1217 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 MRNIPQ6NTE8 343 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 DHFR2Q86XF0 187 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 SLC44A2Q8IWA5 706 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 PCYOX1LQ8NBM8 494 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 PHC3Q8NDX5 983 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 RIN3Q8TB24 985 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 NPY6RQ99463 290 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 C17orf80Q9BSJ5 609 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 FLRT1Q9NZU1 646 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 PDP2Q9P2J9 529 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 EMCNQ9ULC0 261 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 TRAF6Q9Y4K3 522 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 F5H5T6 163 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 NCAM2O15394 837 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 TLR5O60602 858 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 CKMP06732 381 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 AKT1P31749 480 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 CD68P34810 354 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 RGS2P41220 211 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 CCDC92Q53HC0 331 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 NOL9Q5SY16 702 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 STK32CQ86UX6 486 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 ZC3HC1Q86WB0 502 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 SMG8Q8ND04 991 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 ANKRD27Q96NW4 1050 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 GBA3Q9H227 469 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 NMUR1Q9HB89 426 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 GPBP1L1Q9HC44 474 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 CASS4Q9NQ75 786 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 MOCS1Q9NZB8 636 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 DNAJB4Q9UDY4 337 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 TRHDEQ9UKU6 1024 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 CROCCQ5TZA2 2017 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 A0A0D9SEW6 157 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 AKR1A1P14550 325 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 SLC2A4P14672 509 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 KCNA5P22460 613 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 ARRB2P32121 409 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 GKP32189 559 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 MS4A2Q01362 244 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 TRAF2Q12933 501 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 KRT72Q14CN4 511 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 TSNQ15631 228 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 LDLRAP1Q5SW96 308 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 HECTD2Q5U5R9 776 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 IL27RAQ6UWB1 636 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 PRSS55Q6UWB4 352 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 CYP4V2Q6ZWL3 525 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 TMCO2Q7Z6W1 182 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 HERC6Q8IVU3 1022 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 CRYBG2Q8N1P7 616 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 CLDN19Q8N6F1 224 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 UBR7Q8N806 425 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 TXNDC5Q8NBS9 432 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 CALML6Q8TD86 181 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 DDI1Q8WTU0 396 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 PKP2Q99959 881 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 DGCR6LQ9BY27 220 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 CYLDQ9NQC7 956 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 VPS45Q9NRW7 570 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 ABCC13Q9NSE7 274 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 EVLQ9UI08 416 aaPredicted RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 LNPEPQ9UIQ6 1025 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 TRMT6Q9UJA5 497 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 NDUFAF1Q9Y375 327 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 PCDHB12Q9Y5F1 795 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 COPG1Q9Y678 874 aaKnown RBP8.26□□□□□ -1.09
HPS4-201ENST00000336873 COL4A5P29400 1685 aa8.26□□□□□ -1.09
HPS4-201ENST00000336873 SMIM35A0A1B0GVV1 85 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 TBKBP1A7MCY6 615 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms