RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 ACOT9Q9Y305 439 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 SPO11Q9Y5K1 396 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 RAI2Q9Y5P3 530 aa13.55□□□□□ -0.24
LMO1-201ENST00000335790 SCN8AQ9UQD0 1980 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 ANKRD66B4E2M5 251 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 G3V2L1 256 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 H7C0S8 307 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 H2AFYO75367 372 aaKnown RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 RFPL2O75678 378 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 DCTN3O75935 186 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 KLHL2O95198 593 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 CYBBP04839 570 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 SERPINE1P05121 402 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 ATP5BP06576 529 aaKnown RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 NEFHP12036 1026 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 CPA3P15088 417 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 EPCAMP16422 314 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 STMN1P16949 149 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 ABCG1P45844 678 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 PRAMEP78395 509 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 TMPRSS15P98073 1019 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 BNIP1Q12981 228 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 TEAD2Q15562 447 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 ZNF77Q15935 545 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 SPRED3Q2MJR0 410 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 TSNAXIP1Q2TAA8 658 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 CNSTQ6PJW8 725 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 LINGO4Q6UY18 593 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 KIAA0907Q7Z7F0 614 aaPredicted RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 APCDD1Q8J025 514 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 CENPLQ8N0S6 344 aaPredicted RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 TTC30BQ8N4P2 665 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 FITM2Q8N6M3 262 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 BLOC1S5Q8TDH9 187 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 ISG20Q96AZ6 181 aaKnown RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 ZNF707Q96C28 371 aaPredicted RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 TSPAN17Q96FV3 270 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 ATXN7L3BQ96GX2 97 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 CDKN2AIPNLQ96HQ2 116 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 DNAJC1Q96KC8 554 aaKnown RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 TBATAQ96M53 351 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 GPR78Q96P69 363 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 OMDQ99983 421 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 SIKE1Q9BRV8 207 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 NMRAL1Q9HBL8 299 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 ZNF358Q9NW07 568 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 MARK1Q9P0L2 795 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 TBC1D14Q9P2M4 693 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 INTS6Q9UL03 887 aaKnown RBP13.54□□□□□ -0.24
LMO1-201ENST00000335790 KCTD3Q9Y597 815 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 ARL5AQ9Y689 179 aa13.54□□□□□ -0.24
LMO1-201ENST00000335790 CCDC162PA2VCL2 907 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 ZNF197O14709 1029 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 HTRA2O43464 458 aaPredicted RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 DNAJC6O75061 913 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 SOCS5O75159 536 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 DNAJC8O75937 253 aaPredicted RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 UBOX5O94941 541 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 GLP2RO95838 553 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 GOT2P00505 430 aaKnown RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 PDHA1P08559 390 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 F7P08709 466 aaPredicted RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 SBK3P0C264 359 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 AVPR1AP37288 418 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 SKIV2L2P42285 1042 aaKnown RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 SCTRP47872 440 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 GRIA4P48058 902 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 SUOXP51687 545 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 TAS2R39P59534 338 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 RHOAP61586 193 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 IRF9Q00978 393 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 DMC1Q14565 340 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 SLC5A9Q2M3M2 681 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 FAM91A1Q658Y4 838 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 MRNIPQ6NTE8 343 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 ZYG11AQ6WRX3 759 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 SLC41A1Q8IVJ1 513 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 C10orf107Q8IVU9 208 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 CEP97Q8IW35 865 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 MDGA1Q8NFP4 955 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 OR13C4Q8NGS5 318 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 RFWD2Q8NHY2 731 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 RIN3Q8TB24 985 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 EXOC2Q96KP1 924 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 TCF12Q99081 682 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 POPDC3Q9HBV1 291 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 NPHS2Q9NP85 383 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 FBXO6Q9NRD1 293 aaPredicted RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 TDP1Q9NUW8 608 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 INTS10Q9NVR2 710 aaKnown RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 KCNK4Q9NYG8 393 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 MARCH4Q9P2E8 410 aaPredicted RBP13.53□□□□□ -0.24
LMO1-201ENST00000335790 CLEC4EQ9ULY5 219 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 CCL26Q9Y258 94 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 HS3ST2Q9Y278 367 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
LMO1-201ENST00000335790 C2orf81A6NN90 581 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms