RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SLC1A5Q15758 541 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 RANBP10Q6VN20 620 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 USP45Q70EL2 814 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 MAATS1Q7Z4T9 603 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 DEFB119Q8N690 84 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 SCRN2Q96FV2 425 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 TRIM51Q9BSJ1 452 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 CARD6Q9BX69 1037 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 KDM4CQ9H3R0 1056 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 C6orf106Q9H6K1 298 aaPredicted RBP14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 PREBQ9HCU5 417 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 B4GALT6Q9UBX8 382 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 PPIL1Q9Y3C6 166 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 A0A0J9YYE9 177 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 FAM187AA6NFU0 413 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 CAPN8A6NHC0 703 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 ERI2A8K979 691 aaKnown RBP14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 RAD51CO43502 376 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 TSPAN6O43657 245 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 RNGTTO60942 597 aaKnown RBP14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 LILRB5O75023 590 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 TRBC1P01850 177 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 CYP2A6P11509 494 aaPredicted RBP14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 HLA-DPA1P20036 260 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 VIPR1P32241 457 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 MMP12P39900 470 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 TCF15Q12870 199 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 TMEM52BQ4KMG9 183 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 CEP68Q76N32 757 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 C11orf74Q86VG3 221 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 CXorf40AQ8TE69 158 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 MCCC1Q96RQ3 725 aaPredicted RBP14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 WRAP53Q9BUR4 548 aaKnown RBP14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 R4GN57 208 aa14.14□□□□□ -0.15
APOBEC3B-202ENST00000335760 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 A0A1W2PQU0 124 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 NPIPB15A6NHN6 443 aaPredicted RBP14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 MMP20O60882 483 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 SUN1O94901 812 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 FSBPO95073 299 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 FGF1P05230 155 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 PIRTP0C851 137 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 PPP2CBP62714 309 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 PPP2CAP67775 309 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 RALGDSQ12967 914 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 NUMA1Q14980 2115 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 KIAA0895LQ68EN5 471 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 NAPEPLDQ6IQ20 393 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 DENND5AQ6IQ26 1287 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 PPP1R21Q6ZMI0 780 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 DPPA4Q7L190 304 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 LPCAT2Q7L5N7 544 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 TMEFF1Q8IYR6 380 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 MMGT1Q8N4V1 131 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 CPT1BQ92523 772 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 TRIM31Q9BZY9 425 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 L2HGDHQ9H9P8 463 aa14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 EIF2B3Q9NR50 452 aaKnown RBP14.13□□□□□ -0.15
APOBEC3B-202ENST00000335760 A0A0U1RQS6 177 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 TCRBV7S3A2A0A539 114 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 DNALI1O14645 258 aaPredicted RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 TPSB2P20231 275 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 LHCGRP22888 699 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 MAT2AP31153 395 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 LIG3P49916 1009 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 RPS21P63220 83 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 ARHGEF7Q14155 803 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 SIM2Q14190 667 aaPredicted RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 KCNJ11Q14654 390 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 TPSAB1Q15661 275 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 ANKRD22Q5VYY1 191 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 SEL1L3Q68CR1 1132 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 KIAA1161Q6NSJ0 714 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 C8orf74Q6P047 294 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 NEK5Q6P3R8 708 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZC3H14Q6PJT7 736 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 CRTC1Q6UUV9 634 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 LINC00523Q86TU6 105 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 TSPAN33Q86UF1 283 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 HORMAD1Q86X24 394 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 NOA1Q8NC60 698 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 CADM4Q8NFZ8 388 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 OR52K1Q8NGK4 314 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 KLK6Q92876 244 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 LRRC1Q9BTT6 524 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 PCED1AQ9H1Q7 454 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 ARNT2Q9HBZ2 717 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 MAGEE1Q9HCI5 957 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 PIH1D1Q9NWS0 290 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 TPX2Q9ULW0 747 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZFR2Q9UPR6 939 aaKnown RBP14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 SPO11Q9Y5K1 396 aa14.12□□□□□ -0.15
APOBEC3B-202ENST00000335760 CEP192Q8TEP8 1941 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 C1orf232A0A0U1RR37 186 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 IGLON5A6NGN9 336 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 METTL12A8MUP2 240 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 EFCAB8A8MWE9 144 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 HEXIM1O94992 359 aaKnown RBP14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 ELFN1P0C7U0 828 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 TPH1P17752 444 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms