RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 KLF10Q13118 480 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 C15orf59Q2T9L4 293 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 TRABD2AQ86V40 505 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 SPATA5L1Q9BVQ7 753 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 PPIEQ9UNP9 301 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 POLR3HQ9Y535 204 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 FAM205AQ6ZU69 1335 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 ZCCHC11Q5TAX3 1644 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 FAM149AA5PLN7 773 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 A8MX80 341 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 DNM1LO00429 736 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 TBX1O43435 398 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 CPNE3O75131 537 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 LRATO95237 230 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 IDO1P14902 403 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 S100GP29377 79 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 CAMK1Q14012 370 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 TRIM40Q6P9F5 258 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 CLIP4Q8N3C7 705 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 FAM98AQ8NCA5 519 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 ACMSDQ8TDX5 336 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 HOPXQ9BPY8 73 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 ACAT2Q9BWD1 397 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 HPF1Q9NWY4 346 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 MGAT4AQ9UM21 535 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 A0A0J9YYE9 177 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 MAGEC1O60732 1142 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 ANGPTL1O95841 491 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 ITGA2BP08514 1039 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 PSKH1P11801 424 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 PAX3P23760 479 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 DNAJB2P25686 324 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 RAB27AP51159 221 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 CYP2A13Q16696 494 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 KHDC1Q4VXA5 237 aaKnown RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 GPRIN3Q6ZVF9 776 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 CACUL1Q86Y37 369 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 SPERTQ8NA61 448 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 SPATA20Q8TB22 786 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 EFHD2Q96C19 240 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 OR52E6Q96RD3 313 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 ACE2Q9BYF1 805 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 NFKBIZQ9BYH8 718 aa9.84□□□□□ -0.83
COL4A6-201ENST00000334504 BARX2Q9UMQ3 279 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-201ENST00000334504 BBIP1A8MTZ0 92 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CXCL8P10145 99 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 TROAPQ12815 778 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ESRP1Q6NXG1 681 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 FITM2Q8N6M3 262 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 TTC29Q8NA56 475 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 OR4A15Q8NGL6 344 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 HASPINQ8TF76 798 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PANX3Q96QZ0 392 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PANX1Q96RD7 426 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 SNX15Q9NRS6 342 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 INTS10Q9NVR2 710 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 OR6C70A6NIJ9 312 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 OR1E1P30953 314 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RAB15P59190 212 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 TOMM20Q15388 145 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ANKRD13AQ8IZ07 590 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RHBGQ9H310 441 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF304Q9HCX3 659 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 TLR8Q9NR97 1041 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RBM7Q9Y580 266 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 A0A087X0B3 334 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 NDUFS2O75306 463 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 SLC22A3O75751 556 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CALCAP01258 141 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 MPSTP25325 297 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CLCN3P51790 818 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 AP2S1P53680 142 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ZDHHC17Q8IUH5 632 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PRELID2Q8N945 189 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 LPGAT1Q92604 370 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 HDAC2Q92769 488 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 TMCO6Q96DC7 493 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CEP295NLQ96MC4 621 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 WDR55Q9H6Y2 383 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 LRRC19Q9H756 370 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 AK9Q5TCS8 1911 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ZSCAN5BA6NJL1 495 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 I3L521 148 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RFXANKO14593 260 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PLIN3O60664 434 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 VTNP04004 478 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CYP1A2P05177 515 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RPS9P46781 194 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 IRF8Q02556 426 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 GLYATQ6IB77 296 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RFWD3Q6PCD5 774 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 KLHDC10Q6PID8 442 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RASAL3Q86YV0 1011 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 SPAG16Q8N0X2 631 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CLYBLQ8N0X4 340 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 DEFB106AQ8N104 65 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CBR4Q8N4T8 237 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 NKAPQ8N5F7 415 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF433Q8N7K0 673 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 DQX1Q8TE96 717 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms