RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MATN3O15232 486 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 GPC4O75487 556 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 POMCP01189 267 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 SLC4A1P02730 911 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 PYGLP06737 847 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 SLC10A3P09131 477 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 ARSDP51689 593 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 SLC7A2P52569 658 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 HK2P52789 917 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CDKN2DP55273 166 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 USP46P62068 366 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 PABPC1LQ4VXU2 614 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 ARTNQ5T4W7 220 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 RANBP10Q6VN20 620 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CHSY3Q70JA7 882 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 RYBPQ8N488 228 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 PPWD1Q96BP3 646 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 UNC93B1Q9H1C4 597 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CAAP1Q9H8G2 361 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 MARCH4Q9P2E8 410 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 BCAP29Q9UHQ4 241 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CRYL1Q9Y2S2 319 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 HEATR9A2RTY3 570 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 FAM149AA5PLN7 773 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 SUPT7LO94864 414 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 THP07101 528 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 ALDOCP09972 364 aaKnown RBP12.37□□□□□ -0.43
VPS33B-201ENST00000333371 CHRM3P20309 590 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 HOXC8P31273 242 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 RANBP1P43487 201 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 COG7P83436 770 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 PFKPQ01813 784 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 FAM83EQ2M2I3 478 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 RETREG3Q86VR2 466 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 FUNDC1Q8IVP5 155 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 OR52K2Q8NGK3 314 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 TMEM79Q9BSE2 394 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 GSTO2Q9H4Y5 243 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 FAM105AQ9NUU6 356 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 DSEQ9UL01 958 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 CNOT6Q9ULM6 557 aaKnown RBP12.37□□□□□ -0.43
VPS33B-201ENST00000333371 MYO16Q9Y6X6 1858 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 DOCK4Q8N1I0 1966 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 A0A087X1B8 175 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 ARL5CA6NH57 179 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 J3KR12 359 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 TPST1O60507 370 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 SIX3O95343 332 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-201ENST00000333371 CAPNS1P04632 268 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 GEMP55040 296 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 POU4F1Q01851 419 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 RHDQ02161 417 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 SDHAF4Q5VUM1 108 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 GDF6Q6KF10 455 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-201ENST00000333371 POTEHQ6S545 545 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 KLHDC8BQ8IXV7 354 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 OR10T2Q8NGX3 314 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 OR6P1Q8NGX9 317 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 CANT1Q8WVQ1 401 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 MEAF6Q9HAF1 191 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 NT5MQ9NPB1 228 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 NDUFA13Q9P0J0 144 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-201ENST00000333371 SUCOQ9UBS9 1254 aaKnown RBP12.37□□□□□ -0.43
VPS33B-201ENST00000333371 EGFL7Q9UHF1 273 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 CDH9Q9ULB4 789 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
VPS33B-201ENST00000333371 PTPRDP23468 1912 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 SAC3D1A6NKF1 404 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 SOCS2O14508 198 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 IRAK2O43187 625 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 ITGB1P05556 798 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 C8BP07358 591 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 SNRPB2P08579 225 aaKnown RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 LTA4HP09960 611 aaKnown RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 OR4Q2P0C623 313 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 ATP6V1B2P21281 511 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 CTGFP29279 349 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 CD86P42081 329 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 GRIA3P42263 894 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 FOXA1P55317 472 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 FCGRTP55899 365 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 PRAMEP78395 509 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 SQLEQ14534 574 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 HECTD2Q5U5R9 776 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 KIAA0930Q6ICG6 404 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 OR13J1Q8NGT2 312 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 ZFRQ96KR1 1074 aaKnown RBP12.36□□□□□ -0.43
VPS33B-201ENST00000333371 KCNA7Q96RP8 456 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 PREBQ9HCU5 417 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 SPAG4Q9NPE6 437 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 CEPT1Q9Y6K0 416 aa12.36□□□□□ -0.43
VPS33B-201ENST00000333371 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms