RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 PAGE2BQ5JRK9 111 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 ZNF276Q8N554 614 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 DPP10Q8N608 796 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 SLC4A11Q8NBS3 891 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 ARNTL2Q8WYA1 636 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 EGFL7Q9UHF1 273 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 SALL4Q9UJQ4 1053 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 FAM25AB3EWG3 89 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 FAM25CB3EWG5 89 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 FAM25GB3EWG6 89 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 TAF4O00268 1085 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 ZW10O43264 779 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 CNPP09543 421 aaKnown RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 LBPP18428 481 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 MMP8P22894 467 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 PPM1JQ5JR12 505 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 LRRC38Q5VT99 294 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 MON1BQ7L1V2 547 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 MAGEE2Q8TD90 523 aaPredicted RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 HMCESQ96FZ2 354 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 MYO19Q96H55 970 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 FAM210AQ96ND0 272 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 TCF25Q9BQ70 676 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 DGCR6LQ9BY27 220 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHD3-201ENST00000330494 ADGRA3Q8IWK6 1321 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 DUSP11O75319 330 aaKnown RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 TSPAN9O75954 239 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 MFN2O95140 757 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 PABPC1P11940 636 aaKnown RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 HGFP14210 728 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 ZNF37AP17032 561 aaPredicted RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 CDK18Q07002 472 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 PCBP1Q15365 356 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHD3-201ENST00000330494 PRMT9Q6P2P2 845 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 FUT10Q6P4F1 479 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 ARL14EPQ8N8R7 260 aaPredicted RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 C12orf50Q8NA57 414 aaPredicted RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 UXS1Q8NBZ7 420 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 PIWIL2Q8TC59 973 aaKnown RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 ACE2Q9BYF1 805 aaPredicted RBP10.21□□□□□ -0.77
CHD3-201ENST00000330494 GRIP2Q9C0E4 1043 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 KLHL3Q9UH77 587 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 ROBO3Q96MS0 1386 aa10.21□□□□□ -0.77
CHD3-201ENST00000330494 GOLGA4Q13439 2230 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 ERAL1O75616 437 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 RTP1P59025 263 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 GSTA3Q16772 222 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 NKAPQ8N5F7 415 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 OR7D4Q8NG98 312 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 PNPT1Q8TCS8 783 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 ATXN2Q99700 1313 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 SPEF2Q9C093 1822 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 PAIP1Q9H074 479 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 HMGXB4Q9UGU5 601 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 F7P08709 466 aaPredicted RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 MAPK11Q15759 364 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 SCAMP5Q8TAC9 235 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 AZIN2Q96A70 460 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 NIFKQ9BYG3 293 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 APOBEC3GQ9HC16 384 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 LRRC4CQ9HCJ2 640 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 CHRAC1Q9NRG0 131 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 OSER1Q9NX31 292 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 KIAA1522Q9P206 1035 aaPredicted RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 ARHGAP28Q9P2N2 729 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 E7ENQ6 273 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 CLOCKO15516 846 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 FGBP02675 491 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 VAV1P15498 845 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 RAD23AP54725 363 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 CYP4F8P98187 520 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 MPP1Q00013 466 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 CREMQ03060 361 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 LCLAT1Q6UWP7 414 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 MACC1Q6ZN28 852 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 RAVER1Q8IY67 606 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 OR8D1Q8WZ84 308 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 KLK6Q92876 244 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 PGM2Q96G03 612 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 NPAS2Q99743 824 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 RAD21L1Q9H4I0 556 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 DHX33Q9H6R0 707 aaKnown RBP10.21□□□□□ -0.78
CHD3-201ENST00000330494 NDUFA13Q9P0J0 144 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 FBXO5Q9UKT4 447 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 POLR1DQ9Y2S0 133 aa10.21□□□□□ -0.78
CHD3-201ENST00000330494 BTNL10A8MVZ5 291 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 MT-CYBP00156 380 aaPredicted RBP10.2□□□□□ -0.78
CHD3-201ENST00000330494 FCGR1AP12314 374 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 SP2Q02086 613 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 SLC34A1Q06495 639 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
CHD3-201ENST00000330494 GPRIN3Q6ZVF9 776 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 CPNE8Q86YQ8 564 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 RELTQ969Z4 430 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 LHX5Q9H2C1 402 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 ARMC7Q9H6L4 198 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 NMUR1Q9HB89 426 aa10.2□□□□□ -0.78
CHD3-201ENST00000330494 CYLDQ9NQC7 956 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms