RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 HSPA9P38646 679 aaKnown RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 SRP54P61011 504 aaKnown RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 CCDC173Q0VFZ6 552 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 ALG11Q2TAA5 492 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 PPP6R3Q5H9R7 873 aaPredicted RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 BROXQ5VW32 411 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 ENPP7Q6UWV6 458 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 CYP4V2Q6ZWL3 525 aaPredicted RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 HID1Q8IV36 788 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 WDR92Q96MX6 357 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 FCRL3Q96P31 734 aaPredicted RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 ISCUQ9H1K1 167 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 CWC15Q9P013 229 aaKnown RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 SEPT3Q9UH03 358 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 ENTPD2Q9Y5L3 495 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 BZW2Q9Y6E2 419 aaKnown RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 ANKRD36A6QL64 1941 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 COL27A1Q8IZC6 1860 aaPredicted RBP17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 TNFRSF10CO14798 259 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 TNFP01375 233 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 NFKBIAP25963 317 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 TRIM23P36406 574 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 ZNF165P49910 485 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 DPYSQ14117 519 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 NR1I3Q14994 352 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 PERM1Q5SV97 790 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 DPPA4Q7L190 304 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 ZSWIM9Q86XI8 627 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 TSACCQ96A04 125 aaPredicted RBP17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 CCDC97Q96F63 343 aaPredicted RBP17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 RBM15Q96T37 977 aaKnown RBP eCLIP17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 CCDC3Q9BQI4 270 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 KLQ9UEF7 1012 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 COQ6Q9Y2Z9 468 aa17.8■□□□□ 0.44
PTPMT1-201ENST00000326656 HELZ2Q9BYK8 2649 aaKnown RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 H3BRJ5 948 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 DFFAO00273 331 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 CACNB4O00305 520 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 PDE2AO00408 941 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 NTN3O00634 580 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 TRAFD1O14545 582 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 RECQL5O94762 991 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 ARL4AP40617 200 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 RGRP47804 291 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 SCNN1BP51168 640 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 KIAA1024LP59773 190 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 SPIDRQ14159 915 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 PIGHQ14442 188 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 LBRQ14739 615 aaKnown RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 DPYSL2Q16555 572 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 RALGPS1Q5JS13 557 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 LIPIQ6XZB0 460 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 ARL14Q8N4G2 192 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 NPWQ8N729 165 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 PAF1Q8N7H5 531 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 WDR36Q8NI36 951 aaKnown RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 SYN2Q92777 582 aaPredicted RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 ZNF653Q96CK0 615 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 ATXN7L3BQ96GX2 97 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 SATB2Q9UPW6 733 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 SSUH2Q9Y2M2 353 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 SETXQ7Z333 2677 aaKnown RBP17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 MGAQ8IWI9 3026 aa17.79■□□□□ 0.44
PTPMT1-201ENST00000326656 CFAP46Q8IYW2 2715 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 SOCS5O75159 536 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 ELFN1P0C7U0 828 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 TMPRSS3P57727 454 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 RALGDSQ12967 914 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 EIF3IQ13347 325 aaKnown RBP17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 RD3Q7Z3Z2 195 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 LRRC49Q8IUZ0 686 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 BBS5Q8N3I7 341 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 PCDH19Q8TAB3 1148 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 KCNE4Q8WWG9 221 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 SLC39A7Q92504 469 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 NAP1L5Q96NT1 182 aaPredicted RBP17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 TRIM7Q9C029 511 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 GULP1Q9UBP9 304 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 GPR34Q9UPC5 381 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 OR1A2Q9Y585 309 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 LRP4O75096 1905 aa17.78■□□□□ 0.44
PTPMT1-201ENST00000326656 CCDC187A0A096LP49 1063 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 HTRA2O43464 458 aaPredicted RBP17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 PNLIPP16233 465 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 SKOR1P84550 965 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 SLC10A7Q0GE19 358 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 C19orf57Q0VDD7 668 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 TSR1Q2NL82 804 aaKnown RBP17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 C3orf38Q5JPI3 329 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 E4F1Q66K89 784 aaPredicted RBP17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 OGFOD3Q6PK18 319 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 TMCO3Q6UWJ1 677 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 POLNQ7Z5Q5 900 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 OR56A4Q8NGH8 313 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 SNRNP27Q8WVK2 155 aaKnown RBP17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 TEKT4Q8WW24 435 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 IQCDQ96DY2 449 aa17.77■□□□□ 0.44
PTPMT1-201ENST00000326656 WBP1Q96G27 269 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms