RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 TSTD2Q5T7W7 516 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 PSRC1Q6PGN9 363 aaPredicted RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 KLHDC10Q6PID8 442 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 POTEHQ6S545 545 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 HJURPQ8NCD3 748 aaPredicted RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 CLP1Q92989 425 aaKnown RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 BBS2Q9BXC9 721 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 KDM4CQ9H3R0 1056 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 PDFQ9HBH1 243 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 SARS2Q9NP81 518 aaKnown RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 FNIP2Q9P278 1114 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 ARL2BPQ9Y2Y0 163 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 ILVBLA1L0T0 632 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 NEMP2A6NFY4 417 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 CACNG3O60359 315 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 ALDH3A1P30838 453 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 CRHR1P34998 444 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 VIPR2P41587 438 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 ARCN1P48444 511 aaKnown RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 CLCN4P51793 760 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 LMAN2Q12907 356 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 MTDHQ86UE4 582 aaKnown RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 ZNF276Q8N554 614 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 CCNYL1Q8N7R7 359 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 NXNL1Q96CM4 212 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 PRR11Q96HE9 360 aaPredicted RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 RXFP1Q9HBX9 757 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 ARMCX1Q9P291 453 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 FAM50BQ9Y247 325 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 PLXNA3P51805 1871 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 CCDC162PA2VCL2 907 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 CD160O95971 181 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 GOT2P00505 430 aaKnown RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 TROVE2P10155 538 aaKnown RBP eCLIP9.16□□□□□ -0.94
CD46-202ENST00000322918 MYL2P10916 166 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 TSPAN8P19075 237 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 SERPINB8P50452 374 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 TRAF2Q12933 501 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 SHHQ15465 462 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 VWA5B1Q5TIE3 1220 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 ITFG1Q8TB96 612 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 GRIN3AQ8TCU5 1115 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 GDPD5Q8WTR4 605 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 RILPQ96NA2 401 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 TSNARE1Q96NA8 513 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 TMEM237Q96Q45 408 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 PSKH2Q96QS6 385 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 DDX50Q9BQ39 737 aaKnown RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 VPS45Q9NRW7 570 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 SLCO3A1Q9UIG8 710 aa9.16□□□□□ -0.94
CD46-202ENST00000322918 CORO1CQ9ULV4 474 aaPredicted RBP9.16□□□□□ -0.94
CD46-202ENST00000322918 LDB2O43679 373 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 GREM1O60565 184 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 PLIN3O60664 434 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 GLRA3O75311 464 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 LINGO3P0C6S8 592 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 TARSP26639 723 aaKnown RBP9.15□□□□□ -0.94
CD46-202ENST00000322918 CD151P48509 253 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 NRIP1P48552 1158 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 STX3Q13277 289 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 ZRANB3Q5FWF4 1079 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 TAS2R42Q7RTR8 314 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 TTC7BQ86TV6 843 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 CACUL1Q86Y37 369 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 TEX26Q8N6G2 289 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 MDGA1Q8NFP4 955 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 CYB5D2Q8WUJ1 264 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 OLFM1Q99784 485 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 TRIM55Q9BYV6 548 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 CIPCQ9C0C6 399 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 STK38LQ9Y2H1 464 aa9.15□□□□□ -0.94
CD46-202ENST00000322918 MRPS23Q9Y3D9 190 aaKnown RBP9.15□□□□□ -0.94
CD46-202ENST00000322918 TIMM44O43615 452 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 CBX6O95503 412 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 BPGMP07738 259 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 ALADP13716 330 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 CPA3P15088 417 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 STMN1P16949 149 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 USP4Q13107 963 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 SEMA3AQ14563 771 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 LY6G5CQ5SRR4 150 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 SLC30A9Q6PML9 568 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 NAPRTQ6XQN6 538 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 ALYREFQ86V81 257 aaKnown RBP9.15□□□□□ -0.95
CD46-202ENST00000322918 USP13Q92995 863 aaPredicted RBP9.15□□□□□ -0.95
CD46-202ENST00000322918 PHF21BQ96EK2 531 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 TMEM120AQ9BXJ8 343 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 LRRC3Q9BY71 257 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 MYLK2Q9H1R3 596 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 TREX1Q9NSU2 369 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 TDP1Q9NUW8 608 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 HEY2Q9UBP5 337 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 TBC1D30Q9Y2I9 924 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 A0A0C4DFX4 3053 aa9.15□□□□□ -0.95
CD46-202ENST00000322918 CYBBP04839 570 aa9.14□□□□□ -0.95
CD46-202ENST00000322918 CEBPBP17676 345 aa9.14□□□□□ -0.95
CD46-202ENST00000322918 PTPN2P17706 415 aa9.14□□□□□ -0.95
CD46-202ENST00000322918 ITGB6P18564 788 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms