RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TMEM150AQ86TG1 271 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 CILP2Q8IUL8 1156 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 CDKL3Q8IVW4 592 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 SLC2A14Q8TDB8 520 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 SPDL1Q96EA4 605 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 DCUN1D1Q96GG9 259 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PDLIM5Q96HC4 596 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PLEKHG4BQ96PX9 1271 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 NMUR1Q9HB89 426 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 CMTM6Q9NX76 183 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 DNAJC15Q9Y5T4 150 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 B2RBV5 119 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 STX16-NPEPL1H3BU86 382 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PPP6CO00743 305 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 SOCS2O14508 198 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RSL1D1O76021 490 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 LRIG2O94898 1065 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 LUC7L3O95232 432 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 HLA-DQB2P05538 268 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 CD1DP15813 335 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF23P17027 643 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PRPH2P23942 346 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PAPOLAP51003 745 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF135P52742 658 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 NDST2P52849 883 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RPL10AP62906 217 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 DSG1Q02413 1049 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 LPIN1Q14693 890 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 CPNE9Q8IYJ1 553 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PQLC1Q8N2U9 271 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 FIBCD1Q8N539 461 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 DPP10Q8N608 796 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 URGCPQ8TCY9 931 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RSRC1Q96IZ7 334 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF641Q96N77 438 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 CCDC115Q96NT0 180 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ASIC5Q9NY37 505 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 LZTS1Q9Y250 596 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 TCAF1Q9Y4C2 921 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 SNX10Q9Y5X0 201 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ZFHX4Q86UP3 3567 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 TRBV5-4A0A0C4DH59 114 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 MYBPHLA2RUH7 354 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ENO4A6NNW6 628 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 H3BRJ5 948 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 IRAK2O43187 625 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 ITGA9Q13797 1035 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 MROH9Q5TGP6 573 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PKN3Q6P5Z2 889 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RSPO2Q6UXX9 243 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 EEPD1Q7L9B9 569 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 NDUFAF2Q8N183 169 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RHEBL1Q8TAI7 183 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 APOBEC4Q8WW27 367 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 TMEM125Q96AQ2 219 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 MBOAT4Q96T53 435 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 GCOM2Q9BZD3 368 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 IQCGQ9H095 443 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RPF1Q9H9Y2 349 aaKnown RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 SERHLQ9NQF3 203 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 CCM2LQ9NUG4 571 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-201ENST00000315544 NKIRAS1Q9NYS0 192 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 PTTG2Q9NZH5 202 aa7.88□□□□□ -1.15
CNOT4-201ENST00000315544 RGSL1A5PLK6 1076 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 A8MT66 165 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 NDUFS2O75306 463 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 OAZ2O95190 189 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SRGAP2CP0DJJ0 459 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 TCF3P15923 654 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 ZFXP17010 805 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 CAPN3P20807 821 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 ARSDP51689 593 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 DYNLT1P63172 113 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SF3A3Q12874 501 aaKnown RBP eCLIP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 CAMK1Q14012 370 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 ODF2Q5BJF6 829 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PDPK2PQ6A1A2 396 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 PSRC1Q6PGN9 363 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 C14orf80Q86SX3 495 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 TAC4Q86UU9 113 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 ADCY4Q8NFM4 1077 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 ZNF566Q969W8 418 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 MYRFLQ96LU7 910 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 DDX50Q9BQ39 737 aaKnown RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 WWP1Q9H0M0 922 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 ZCWPW1Q9H0M4 648 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SCUBE2Q9NQ36 999 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SLC38A7Q9NVC3 462 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 TMEM248Q9NWD8 314 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 GALPQ9UBC7 116 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 STOML1Q9UBI4 398 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 CACNG4Q9UBN1 327 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 USTQ9Y2C2 406 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 KANSL1LA0AUZ9 987 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 RRN3P2A6NIE6 340 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 H3BRB1 525 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 MATN3O15232 486 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 H2AFYO75367 372 aaKnown RBP7.87□□□□□ -1.15
CNOT4-201ENST00000315544 GRAP2O75791 330 aa7.87□□□□□ -1.15
CNOT4-201ENST00000315544 SULT1C4O75897 302 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms