RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FBXL6Q8N531 539 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 RTL3Q8N8U3 475 aaKnown RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 ATP11CQ8NB49 1132 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 KCTD6Q8NC69 237 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 WFIKKN2Q8TEU8 576 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 HSPH1Q92598 858 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 FAF2Q96CS3 445 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 TREX2Q9BQ50 279 aaPredicted RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 FEM1AQ9BSK4 669 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 OSBPL10Q9BXB5 764 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 B3GNT4Q9C0J1 378 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 LMAN1LQ9HAT1 526 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 PCDH18Q9HCL0 1135 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 ABCB8Q9NUT2 735 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 NDFIP2Q9NV92 336 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 ELOVL2Q9NXB9 296 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 GGA2Q9UJY4 613 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 PTBP2Q9UKA9 531 aaKnown RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 GUCA1BQ9UMX6 200 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 NDRG2Q9UN36 371 aaKnown RBP8.35□□□□□ -1.07
CHD6-201ENST00000309279 ANKRD6Q9Y2G4 727 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 HYOU1Q9Y4L1 999 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 CAPN6Q9Y6Q1 641 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 ZNF318Q5VUA4 2279 aa8.35□□□□□ -1.07
CHD6-201ENST00000309279 DMDP11532 3685 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 CXorf51AA0A1B0GTR3 108 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 C3orf70A6NLC5 250 aaPredicted RBP8.34□□□□□ -1.07
CHD6-201ENST00000309279 A6NNZ2 444 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 CHURC1-FNTBB4DL54 471 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 B9A039 149 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 DLL1O00548 723 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 NPC1O15118 1278 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 ZSCAN12O43309 604 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 CEP104O60308 925 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 ERLIN1O75477 346 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 SLC22A3O75751 556 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 CD48P09326 243 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 HNRNPLP14866 589 aaKnown RBP eCLIP8.34□□□□□ -1.077e-9■■■■■ 54.9
CHD6-201ENST00000309279 ERCC2P18074 760 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 KDELR1P24390 212 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 ARL4AP40617 200 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 MAGEA9P43362 315 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 NR2C2P49116 596 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 MRPS21P82921 87 aaKnown RBP8.34□□□□□ -1.07
CHD6-201ENST00000309279 ENPP2Q13822 863 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 DPYSL3Q14195 570 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 GAS6Q14393 721 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 FUT11Q495W5 492 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 HSF5Q4G112 596 aaPredicted RBP8.34□□□□□ -1.07
CHD6-201ENST00000309279 FCRLBQ6BAA4 426 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 IKBIPQ70UQ0 350 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 REXO1L1PQ8IX06 675 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 APCDD1Q8J025 514 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 SPDYE1Q8NFV5 336 aaPredicted RBP8.34□□□□□ -1.07
CHD6-201ENST00000309279 RAPGEF5Q92565 580 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 ZNF670Q9BS34 389 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 C1QTNF1Q9BXJ1 281 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 KLC2Q9H0B6 622 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 WNT5BQ9H1J7 359 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 CHRDQ9H2X0 955 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 NOL6Q9H6R4 1146 aaKnown RBP8.34□□□□□ -1.07
CHD6-201ENST00000309279 LZTFL1Q9NQ48 299 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 HOMER3Q9NSC5 361 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 RBM12Q9NTZ6 932 aaKnown RBP8.34□□□□□ -1.07
CHD6-201ENST00000309279 PPP1R14DQ9NXH3 145 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 IL1RAPL1Q9NZN1 696 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 PCDHA3Q9Y5H8 950 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 SPO11Q9Y5K1 396 aa8.34□□□□□ -1.07
CHD6-201ENST00000309279 A0A0D9SEW6 157 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 ANTXRLA6NF34 631 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 DCLK1O15075 740 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 RNF40O75150 1001 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 ATP5BP06576 529 aaKnown RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 DCNP07585 359 aaKnown RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 RHOCP08134 193 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 DLDP09622 509 aaKnown RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 TPP2P29144 1249 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 CSKP41240 450 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 GSK3AP49840 483 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 RPS6KA3P51812 740 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 CLNS1AP54105 237 aaKnown RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 YBEYP58557 167 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 GNA12Q03113 381 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 SULT2A1Q06520 285 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 KRT81Q14533 505 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 TEAD4Q15561 434 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 TAZQ16635 292 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 DBN1Q16643 649 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 PTPRNQ16849 979 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 SMUG1Q53HV7 270 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 ANKRD20A8PQ5CZ79 823 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 PITRM1Q5JRX3 1037 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 EMC10Q5UCC4 262 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 AFMIDQ63HM1 303 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 MBLAC2Q68D91 279 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 RPUSD3Q6P087 351 aaKnown RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 C11orf88Q6PI97 169 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 SYDE1Q6ZW31 735 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 PEX26Q7Z412 305 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms