RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF394Q53GI3 561 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 WASHC2DQ5SRD0 308 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 NUGGCQ68CJ6 796 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 AADACL2Q6P093 401 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ALKAL1Q6UXT8 129 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 OTUD6AQ7L8S5 288 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TBC1D1Q86TI0 1168 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 RHOT1Q8IXI2 618 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 EXOC8Q8IYI6 725 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 RCOR2Q8IZ40 523 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 PPM1KQ8N3J5 372 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ZCCHC9Q8N567 271 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TEX9Q8N6V9 391 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM161BQ8NDZ6 487 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 PLEKHO2Q8TD55 490 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 DENND1AQ8TEH3 1009 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 MAML1Q92585 1016 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ELSPBP1Q96BH3 223 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 KLHL29Q96CT2 875 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 RBM41Q96IZ5 413 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ZMAT2Q96NC0 199 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 LRRC3BQ96PB8 259 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 CBWD1Q9BRT8 395 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TRIM6Q9C030 488 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 LRMDAQ9H2I8 198 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF334Q9HCZ1 680 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 RXFP3Q9NSD7 469 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 ABCF3Q9NUQ8 709 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 FGFR1OP2Q9NVK5 253 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 RAB20Q9NX57 234 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 NINJ2Q9NZG7 142 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 CGGBP1Q9UFW8 167 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 BAIAP2L1Q9UHR4 511 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 SLC24A2Q9UI40 661 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 TBX20Q9UMR3 447 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 USP18Q9UMW8 372 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 NDRG2Q9UN36 371 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 CNTN6Q9UQ52 1028 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 EFR3BQ9Y2G0 817 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 MRPS23Q9Y3D9 190 aaKnown RBP5.02□□□□□ -1.61
CKS1B-201ENST00000308987 USH1CQ9Y6N9 552 aa5.02□□□□□ -1.61
CKS1B-201ENST00000308987 GOLGA4Q13439 2230 aaKnown RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 CABIN1Q9Y6J0 2220 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PLXND1Q9Y4D7 1925 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 FLNBO75369 2602 aaKnown RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 APC2O95996 2303 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SMIM28A0A1B0GU29 152 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 TCRBV7S2A1N4TA0A589 114 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 C7orf72A4D263 438 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PRR5-ARHGAP8B1AHC4 643 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 DNALI1O14645 258 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SLC30A4O14863 429 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ALOX15BO15296 676 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 KCNH1O95259 989 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ANP32DO95626 131 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ASMTLO95671 621 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 IL1BP01584 269 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PRKCBP05771 671 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ADRB2P07550 413 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 TAC1P20366 129 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 TBXAS1P24557 533 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ADSSP30520 456 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 GCKP35557 465 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ADCY8P40145 1251 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 MAGEA4P43358 317 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 NSFP46459 744 aaKnown RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 KCNJ1P48048 391 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SOX9P48436 509 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 IFNAR2P48551 515 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 FNTBP49356 437 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 CLNS1AP54105 237 aaKnown RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ARHGAP8P85298 464 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PFKPQ01813 784 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 CREMQ03060 361 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 CYP24A1Q07973 514 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 TFDP1Q14186 410 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SPARCL1Q14515 664 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PSMD6Q15008 389 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 MORF4L2Q15014 288 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ZKSCAN8Q15776 578 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PDK4Q16654 411 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 KYNUQ16719 465 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ST3GAL2Q16842 350 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 LONRF1Q17RB8 773 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 CCDC38Q502W7 563 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SLC45A4Q5BKX6 768 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 FAM133BQ5BKY9 247 aaKnown RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 XKR4Q5GH76 650 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 STXBP5Q5T5C0 1151 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PLEKHA7Q6IQ23 1121 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SLC8B1Q6J4K2 584 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PKN3Q6P5Z2 889 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF852Q6ZMS4 543 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 Q6ZS52 159 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 MON1BQ7L1V2 547 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 MILR1Q7Z6M3 343 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PCGF5Q86SE9 256 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 TRABD2AQ86V40 505 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SLC47A2Q86VL8 602 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms