RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GRIK2Q13002 908 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ARHGEF18Q6ZSZ5 1173 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PTAR1Q7Z6K3 402 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FAM174AQ8TBP5 190 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SPOCK2Q92563 424 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 RMDN1Q96DB5 314 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PBKQ96KB5 322 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 NSMCE3Q96MG7 304 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SPATA13Q96N96 652 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 NAP1L3Q99457 506 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FSD1LQ9BXM9 530 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GBA3Q9H227 469 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 C10orf88Q9H8K7 445 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 EBF2Q9HAK2 575 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CAPN10Q9HC96 672 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 TMEM9BQ9NQ34 198 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FAM153AQ9UHL3 310 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 RPL26L1Q9UNX3 145 aaKnown RBP11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 R3HDM2Q9Y2K5 976 aaKnown RBP11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ZKSCAN5Q9Y2L8 839 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 COQ6Q9Y2Z9 468 aa11.05□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MYLKQ15746 1914 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 A0A0J9YYE9 177 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 A0A1B0GVT2 93 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CAPN8A6NHC0 703 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 A8MX80 341 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 C10orf142B7Z368 130 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FPGTO14772 594 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 VILLO15195 856 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LIASO43766 372 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FZD6O60353 706 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PMPCBO75439 489 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ANXA9O76027 345 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PAK4O96013 591 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MT-CYBP00156 380 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 TRBC1P01850 177 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ATP1A1P05023 1023 aaKnown RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MMP2P08253 660 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PDHA1P08559 390 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ZNF30P17039 623 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ITIH2P19823 946 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 TGM1P22735 817 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CD68P34810 354 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CSNK1EP49674 416 aaKnown RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LIG3P49916 1009 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GEMP55040 296 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GNG11P61952 73 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SEMG2Q02383 582 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 OVGP1Q12889 678 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 RALGDSQ12967 914 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MPP3Q13368 585 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GALNT3Q14435 633 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ACOX1Q15067 660 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ANKRD20A2Q5SQ80 823 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ANKRD20A1Q5TYW2 823 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ANKRD20A3Q5VUR7 823 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 DENND2CQ68D51 928 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LAYNQ6UX15 382 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 KYAT3Q6YP21 454 aaKnown RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 IQCHQ86VS3 1027 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MFSD2AQ8NA29 543 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SPATA22Q8NHS9 363 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 C1orf216Q8TAB5 229 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SLC35B2Q8TB61 432 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CCDC110Q8TBZ0 833 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 NETO1Q8TDF5 533 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PIH1D2Q8WWB5 315 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 C1orf54Q8WWF1 131 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ASB12Q8WXK4 309 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ATG4AQ8WYN0 398 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 TRIM44Q96DX7 344 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SCRN2Q96FV2 425 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 KLHDC7BQ96G42 594 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LENG8Q96PV6 779 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FCRL5Q96RD9 977 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 OSBPL9Q96SU4 736 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ORAI3Q9BRQ5 295 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 TMEM121Q9BTD3 319 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 MLPHQ9BV36 600 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 FSCN3Q9NQT6 498 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 HOMER3Q9NSC5 361 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 KCTD5Q9NXV2 234 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 UBP1Q9NZI7 540 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ZNF148Q9UQR1 794 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ANKRD6Q9Y2G4 727 aa11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 AAR2Q9Y312 384 aaKnown RBP11.04□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 NPIPB15A6NHN6 443 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PSMD11O00231 422 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PCCBP05166 539 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 ALPIP09923 528 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 TCP1P17987 556 aaKnown RBP11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 SDHBP21912 280 aa11.03□□□□□ -0.64
CSPG4P2Y-201ENST00000306853 PSMB4P28070 264 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms