RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 SLC7A4O43246 635 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 SNNO75324 88 aaPredicted RBP25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 HLA-FP30511 346 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 SCTRP47872 440 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 HSF5Q4G112 596 aaPredicted RBP25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 OR4K2Q8NGD2 314 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 TASP1Q9H6P5 420 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 ABCB8Q9NUT2 735 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 S1PR4O95977 384 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 PBX2P40425 430 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 LEPRP48357 1165 aaKnown RBP25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 ACVR1Q04771 509 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 ITGA9Q13797 1035 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 INO80DQ53TQ3 878 aaPredicted RBP25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 CAMK1DQ8IU85 385 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 NXNL1Q96CM4 212 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 MYLK2Q9H1R3 596 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 TLK1Q9UKI8 766 aa25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 FNDC3AQ9Y2H6 1198 aaKnown RBP25.75■■□□□ 1.71
SDCCAG3-201ENST00000298537 TRIM24O15164 1050 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 DLDP09622 509 aaKnown RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 RAB10P61026 200 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 STX3Q13277 289 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 PLEKHG6Q3KR16 790 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 LACTB2Q53H82 288 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 NAPRTQ6XQN6 538 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 GLT6D1Q7Z4J2 308 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 LBHD1Q9BQE6 289 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 NMRAL1Q9HBL8 299 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 BPIFA1Q9NP55 256 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 EVLQ9UI08 416 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 RUVBL2Q9Y230 463 aaKnown RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 PCDHB9Q9Y5E1 797 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 USH1CQ9Y6N9 552 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 ZNF821O75541 412 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 PIGNO95427 931 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 CPA3P15088 417 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 CDKN1CP49918 316 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 ZNF140P52738 457 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 NLRP9Q7RTR0 991 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 ARID3BQ8IVW6 561 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 PPP1R14CQ8TAE6 165 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 ZNF707Q96C28 371 aaPredicted RBP25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 TDP1Q9NUW8 608 aa25.74■■□□□ 1.71
SDCCAG3-201ENST00000298537 ANKRD66B4E2M5 251 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 STMN1P16949 149 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 CEBPBP17676 345 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 CTPS1P17812 591 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 PRSS36Q5K4E3 855 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 ATG16L1Q676U5 607 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 FIBINQ8TAL6 211 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 ERP27Q96DN0 273 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 PRR11Q96HE9 360 aaPredicted RBP25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 CDKN2AIPNLQ96HQ2 116 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 LMLNQ96KR4 655 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 TRIM55Q9BYV6 548 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 TLE6Q9H808 572 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 ZNF510Q9Y2H8 683 aa25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 YBX2Q9Y2T7 364 aaKnown RBP25.73■■□□□ 1.71
SDCCAG3-201ENST00000298537 NEDD8-MDP1E9PL57 170 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 RPP40O75818 363 aaKnown RBP25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 TROVE2P10155 538 aaKnown RBP eCLIP25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 CDKN2DP55273 166 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 SHHQ15465 462 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 GALNTL6Q49A17 601 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 PIM3Q86V86 326 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 FAM136AQ96C01 138 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 GPR78Q96P69 363 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 C2orf49Q9BVC5 232 aaPredicted RBP25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 TMEM120AQ9BXJ8 343 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 HELZP42694 1942 aaKnown RBP25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 GBF1Q92538 1859 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 SPTBN5Q9NRC6 3674 aaKnown RBP25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 GPR39O43194 453 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 ALPIP09923 528 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 UBE3AQ05086 875 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 DGKKQ5KSL6 1271 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 ITFG1Q8TB96 612 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 SLC12A4Q9UP95 1085 aa25.72■■□□□ 1.71
SDCCAG3-201ENST00000298537 CD3EAPO15446 510 aaKnown RBP25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 SLC12A1Q13621 1099 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 CCDC153Q494R4 210 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 FUT11Q495W5 492 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 ZNF549Q6P9A3 640 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 FSTL5Q8N475 847 aaPredicted RBP25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 CALML6Q8TD86 181 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 C7orf26Q96N11 449 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 LRRC3BQ96PB8 259 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 HAUS2Q9NVX0 235 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 ACOT9Q9Y305 439 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 WNT6Q9Y6F9 365 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 GSTA1P08263 222 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 ACTN3Q08043 901 aaPredicted RBP25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 NSUN2Q08J23 767 aaKnown RBP eCLIP25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 SLC14A2Q15849 920 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 MPP7Q5T2T1 576 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 HECTD2Q5U5R9 776 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 TMEM207Q6UWW9 146 aa25.71■■□□□ 1.71
SDCCAG3-201ENST00000298537 KIAA0408Q6ZU52 694 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms