RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 GSTO2Q9H4Y5 243 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 CATSPERBQ9H7T0 1116 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 SNRPB2P08579 225 aaKnown RBP24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 ALDOCP09972 364 aaKnown RBP24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 PSMC3P17980 439 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 ADSLP30566 484 aaPredicted RBP24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 CDH15P55291 814 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 PRAMEP78395 509 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 CAPRIN1Q14444 709 aaKnown RBP24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 RFTN1Q14699 578 aaPredicted RBP24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 KIF19Q2TAC6 998 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 ALFQ53S48 1182 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 HMBOX1Q6NT76 420 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 USP50Q70EL3 339 aaPredicted RBP24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 RETREG3Q86VR2 466 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 PTERQ96BW5 349 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 NSUN5Q96P11 429 aaKnown RBP24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 VWA7Q9Y334 891 aa24.49■■□□□ 1.51
SPTSSA-201ENST00000298130 TBX18O95935 607 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 IGLV3-25P01717 112 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 CHRNA1P02708 482 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 GRIA3P42263 894 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 MRPS6P82932 125 aaKnown RBP24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 STX5Q13190 355 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 CHSY3Q70JA7 882 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 MEAF6Q9HAF1 191 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 SAC3D1A6NKF1 404 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 MGEA5O60502 916 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 HSPA1AP0DMV8 641 aaKnown RBP24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 HSPA1BP0DMV9 641 aaKnown RBP24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 SERPINH1P50454 418 aaKnown RBP24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 IKBKEQ14164 716 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 C6orf10Q5SRN2 563 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 PIK3R6Q5UE93 754 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 KDELC1Q6UW63 502 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 FUNDC1Q8IVP5 155 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 TMEM79Q9BSE2 394 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 SPAG4Q9NPE6 437 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 AURKCQ9UQB9 309 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 ARHGEF37A1IGU5 675 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 NR5A2O00482 541 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 HMBSP08397 361 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 ODC1P11926 461 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 DNAJB13P59910 316 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 SQLEQ14534 574 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 FSCN1Q16658 493 aaKnown RBP24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 VPS26BQ4G0F5 336 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 FAM171BQ6P995 826 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 AHI1Q8N157 1196 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 CATSPER1Q8NEC5 780 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 CANT1Q8WVQ1 401 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 PSMG2Q969U7 264 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 TBATAQ96M53 351 aa24.48■■□□□ 1.51
SPTSSA-201ENST00000298130 A0A1B0GTL3 188 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 TRIM24O15164 1050 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 NRP2O60462 931 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 CD52P31358 61 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 CPT1AP50416 773 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 OVOS1Q6IE37 1185 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 KLC3Q6P597 504 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 B4GALNT2Q8NHY0 566 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 MRPS26Q9BYN8 205 aaKnown RBP24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 ABI2Q9NYB9 513 aaPredicted RBP24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 M0QZ92 97 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 PDLIM1O00151 329 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 SH3BP2P78314 561 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 PURAQ00577 322 aaKnown RBP24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 RHDQ02161 417 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 MAP7Q14244 749 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 DDR2Q16832 855 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 MANEALQ5VSG8 457 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 ARHGAP22Q7Z5H3 698 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 CILP2Q8IUL8 1156 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 RTL3Q8N8U3 475 aaKnown RBP24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 CROTQ9UKG9 612 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 CNOT6Q9ULM6 557 aaKnown RBP24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 BTRCQ9Y297 605 aa24.47■■□□□ 1.51
SPTSSA-201ENST00000298130 AKAP10O43572 662 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 DNAJB2P25686 324 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 RGS2P41220 211 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 RPL26P61254 145 aaKnown RBP24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 ECT2LQ008S8 904 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 EIF4EBP2Q13542 120 aaPredicted RBP24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 FAM110CQ1W6H9 321 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 GDF6Q6KF10 455 aaPredicted RBP24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 CD300LGQ6UXG3 332 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 ISCA2Q86U28 154 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 METTL23Q86XA0 190 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 KLHDC8BQ8IXV7 354 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 ACBD6Q9BR61 282 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 RBM38Q9H0Z9 239 aaKnown RBP24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 ZNF696Q9H7X3 374 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 AKTIPQ9H8T0 292 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 EML4Q9HC35 981 aaKnown RBP24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 NYNRINQ9P2P1 1898 aaKnown RBP24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 ATP6V1B2P21281 511 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 GRB7Q14451 532 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 BLOC1S5Q8TDH9 187 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 IRGQQ8WZA9 623 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 UXTQ9UBK9 157 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms