RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 E2F5Q15329 346 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 TBC1D25Q3MII6 688 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 RNF187Q5TA31 235 aaPredicted RBP15.62■□□□□ 0.09
LSM6-201ENST00000296581 LMNTD2Q8IXW0 634 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 GABPB2Q8TAK5 448 aaPredicted RBP15.62■□□□□ 0.09
LSM6-201ENST00000296581 SPOCK2Q92563 424 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 RMDN1Q96DB5 314 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 LRRC3BQ96PB8 259 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 NSRP1Q9H0G5 558 aaKnown RBP15.62■□□□□ 0.09
LSM6-201ENST00000296581 FBXO5Q9UKT4 447 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 HS3ST2Q9Y278 367 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 CCDC85CA6NKD9 419 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 ZNF821O75541 412 aaPredicted RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 CRTAMO95727 393 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 RPSAP08865 295 aaKnown RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 PABPC1P11940 636 aaKnown RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 TYK2P29597 1187 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 SLC8A1P32418 973 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 MAPK8P45983 427 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 MPP1Q00013 466 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 CTBP1Q13363 440 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 DMC1Q14565 340 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 ZNF470Q6ECI4 717 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 GALNT7Q86SF2 657 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 NPAS3Q8IXF0 933 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.61■□□□□ 0.09
LSM6-201ENST00000296581 LPCAT1Q8NF37 534 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 STYXQ8WUJ0 223 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 HDAC10Q969S8 669 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 MRPL38Q96DV4 380 aaKnown RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 ATXN7L3BQ96GX2 97 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 RSRC1Q96IZ7 334 aaKnown RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 SLC2A11Q9BYW1 496 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 GGA2Q9UJY4 613 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 ARL5AQ9Y689 179 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 ANKRD66B4E2M5 251 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 GLRA3O75311 464 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 PIRTP0C851 137 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 SRCP12931 536 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 CTSOP43234 321 aaPredicted RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 ABCG1P45844 678 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 POLD2P49005 469 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 ZNF140P52738 457 aaPredicted RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 GRM3Q14832 879 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 TAF1AQ15573 450 aaPredicted RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 INSCQ1MX18 579 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 PIGWQ7Z7B1 504 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 KIAA0907Q7Z7F0 614 aaPredicted RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 ISG20Q96AZ6 181 aaKnown RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 RSPRY1Q96DX4 576 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 DNAJC1Q96KC8 554 aaKnown RBP15.61■□□□□ 0.09
LSM6-201ENST00000296581 TM6SF2Q9BZW4 377 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 DCDC2Q9UHG0 476 aa15.61■□□□□ 0.09
LSM6-201ENST00000296581 TRANK1O15050 2925 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 ENO4A6NNW6 628 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 RPP40O75818 363 aaKnown RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 MPOP05164 745 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 DGKKQ5KSL6 1271 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 KYAT3Q6YP21 454 aaKnown RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 TMEM184AQ6ZMB5 413 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 CMC1Q7Z7K0 106 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 DRAXINQ8NBI3 349 aaPredicted RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 ACVR1CQ8NER5 493 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 LRRC8CQ8TDW0 803 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 PPP2R3CQ969Q6 453 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 FGFR1OP2Q9NVK5 253 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 GLP2RO95838 553 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 IGSF6O95976 241 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 FSHRP23945 695 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 LEPRP48357 1165 aaKnown RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 CD151P48509 253 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 SERPINB4P48594 390 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 PRAMEP78395 509 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 SULT2A1Q06520 285 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 PPM1JQ5JR12 505 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 RARS2Q5T160 578 aaKnown RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 GKAP1Q5VSY0 366 aaPredicted RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 GPR149Q86SP6 731 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 MDGA1Q8NFP4 955 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 OSCP1Q8WVF1 389 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 ZNF75CPQ92670 426 aaPredicted RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 TBATAQ96M53 351 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 NLE1Q9NVX2 485 aaPredicted RBP15.6■□□□□ 0.09
LSM6-201ENST00000296581 FBXO10Q9UK96 956 aa15.6■□□□□ 0.09
LSM6-201ENST00000296581 RFXAPO00287 272 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 TRAFD1O14545 582 aaPredicted RBP15.59■□□□□ 0.09
LSM6-201ENST00000296581 HTRA2O43464 458 aaPredicted RBP15.59■□□□□ 0.09
LSM6-201ENST00000296581 PGLSO95336 258 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 TOP3BO95985 862 aaKnown RBP15.59■□□□□ 0.09
LSM6-201ENST00000296581 STK19P49842 368 aaPredicted RBP15.59■□□□□ 0.09
LSM6-201ENST00000296581 RPL26P61254 145 aaKnown RBP15.59■□□□□ 0.09
LSM6-201ENST00000296581 DHCR24Q15392 516 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 FAM78AQ5JUQ0 283 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 GLT6D1Q7Z4J2 308 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 CLEC14AQ86T13 490 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 ADIPOR2Q86V24 386 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 CILP2Q8IUL8 1156 aa15.59■□□□□ 0.09
LSM6-201ENST00000296581 OR2AP1Q8NGE2 309 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms