RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ATP5F1P24539 256 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PSMA4P25789 261 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PPP1R8Q12972 351 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 GRB7Q14451 532 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 RPS6KA2Q15349 733 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ZNF829Q3KNS6 432 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 BTBD8Q5XKL5 378 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ANKRD26P1Q6NSI1 321 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 CHST13Q8NET6 341 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 OR52K2Q8NGK3 314 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 TMEM74Q96NL1 305 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 CAMKK2Q96RR4 588 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 MAP10Q9P2G4 905 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ST14Q9Y5Y6 855 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 TTC24A2A3L6 582 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ZNF487B1APH4 448 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 GAS2O43903 313 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 NOL3O60936 208 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 USP17L7P0C7H9 530 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ARNTP27540 789 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 NPY2RP49146 381 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 BCAP31P51572 246 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 MLLT10P55197 1068 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ECT2LQ008S8 904 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 MAPRE2Q15555 327 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 TMEM214Q6NUQ4 689 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 DHRS4L2Q6PKH6 230 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PIWIL3Q7Z3Z3 882 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 PIM3Q86V86 326 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 DHRSXQ8N5I4 330 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 SMG8Q8ND04 991 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 WNT8BQ93098 351 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ULBP1Q9BZM6 244 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 DNAI2Q9GZS0 605 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
COL8A1-202ENST00000273342 ANGPT2O15123 496 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 KPNA6O60684 536 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 BAIAP3O94812 1187 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 IPO13O94829 963 aaKnown RBP12.96□□□□□ -0.33
COL8A1-202ENST00000273342 BMP2P12643 396 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 CPB1P15086 417 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 CAPN3P20807 821 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 FOXA1P55317 472 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 PLA2G4EQ3MJ16 856 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 TBPL2Q6SJ96 375 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 ANKFN1Q8N957 763 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
COL8A1-202ENST00000273342 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.33
COL8A1-202ENST00000273342 DGCR6LQ9BY27 220 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 SPATC1LQ9H0A9 340 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 AKTIPQ9H8T0 292 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 SACM1LQ9NTJ5 587 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 TBCCD1Q9NVR7 557 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 OR12D3Q9UGF7 316 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 FBXO5Q9UKT4 447 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 STAP1Q9ULZ2 295 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 CRYL1Q9Y2S2 319 aa12.96□□□□□ -0.33
COL8A1-202ENST00000273342 LINC00032P0C843 101 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 TGFB3P10600 412 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 FBXO47Q5MNV8 452 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 GPR158Q5T848 1215 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 NAPEPLDQ6IQ20 393 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 CYHR1Q6ZMK1 362 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 ACDQ96AP0 544 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 NPY6RQ99463 290 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 NEURL2Q9BR09 285 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 MCMBPQ9BTE3 642 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 ELP3Q9H9T3 547 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 MRPL40Q9NQ50 206 aaKnown RBP12.96□□□□□ -0.34
COL8A1-202ENST00000273342 CCM2LQ9NUG4 571 aaPredicted RBP12.96□□□□□ -0.34
COL8A1-202ENST00000273342 SLAMF8Q9P0V8 285 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 ZNHIT2Q9UHR6 403 aa12.96□□□□□ -0.34
COL8A1-202ENST00000273342 MAGEB16A2A368 324 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 OR51F1A6NGY5 319 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 CDH3P22223 829 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 MYF6P23409 242 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 CD151P48509 253 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TMED10P49755 219 aaKnown RBP12.95□□□□□ -0.34
COL8A1-202ENST00000273342 GSTM4Q03013 218 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TRAP1Q12931 704 aaKnown RBP12.95□□□□□ -0.34
COL8A1-202ENST00000273342 CARTPTQ16568 116 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 PKN3Q6P5Z2 889 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 ABRAXAS1Q6UWZ7 409 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 PLPPR4Q7Z2D5 763 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 DCBLD1Q8N8Z6 715 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TEKT5Q96M29 485 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 MUS81Q96NY9 551 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 NSUN5Q96P11 429 aaKnown RBP12.95□□□□□ -0.34
COL8A1-202ENST00000273342 RHOBTB2Q9BYZ6 727 aa12.95□□□□□ -0.34
COL8A1-202ENST00000273342 TKTL2Q9H0I9 626 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms