RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 SIX3O95343 332 aaPredicted RBP22.25■■□□□ 1.15
CDR2-201ENST00000268383 C8BP07358 591 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 LTA4HP09960 611 aaKnown RBP22.25■■□□□ 1.15
CDR2-201ENST00000268383 ATP6V1B2P21281 511 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 DNAJB13P59910 316 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 ARTNQ5T4W7 220 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 HECTD2Q5U5R9 776 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 TRIML2Q8N7C3 387 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 ENTPD7Q9NQZ7 604 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 UTP6Q9NYH9 597 aaKnown RBP22.25■■□□□ 1.15
CDR2-201ENST00000268383 CDH9Q9ULB4 789 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 DMTF1Q9Y222 760 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 ARL5CA6NH57 179 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 J3KR12 359 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 PDLIM1O00151 329 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 CD86P42081 329 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 SDHAF4Q5VUM1 108 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 KIAA0930Q6ICG6 404 aaPredicted RBP22.24■■□□□ 1.15
CDR2-201ENST00000268383 IRAK2O43187 625 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 NRP2O60462 931 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 GNAO1P09471 354 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 PAMP19021 973 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 ETFBP38117 255 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 FOXA1P55317 472 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 CAPRIN1Q14444 709 aaKnown RBP22.24■■□□□ 1.15
CDR2-201ENST00000268383 PCBP1Q15365 356 aaKnown RBP eCLIP22.24■■□□□ 1.15
CDR2-201ENST00000268383 CCL14Q16627 93 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 AGAP9Q5VTM2 703 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 KLHDC8BQ8IXV7 354 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 OR13J1Q8NGT2 312 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 OR10T2Q8NGX3 314 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 MS4A4AQ96JQ5 239 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 ZNF597Q96LX8 424 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 KCNA7Q96RP8 456 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 FAM105AQ9NUU6 356 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 CD300AQ9UGN4 299 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 CROTQ9UKG9 612 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 ST3GAL5Q9UNP4 418 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 AURKCQ9UQB9 309 aa22.24■■□□□ 1.15
CDR2-201ENST00000268383 SCN4AP35499 1836 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 AP3B1O00203 1094 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 AKAP10O43572 662 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 B3GAT3O94766 335 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 CDH2P19022 906 aaPredicted RBP22.23■■□□□ 1.15
CDR2-201ENST00000268383 NDST2P52849 883 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 LCA5Q86VQ0 697 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 PTERQ96BW5 349 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 IPO11Q9UI26 975 aaKnown RBP22.23■■□□□ 1.15
CDR2-201ENST00000268383 PTCH2Q9Y6C5 1203 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 FNDC1Q4ZHG4 1894 aaPredicted RBP22.23■■□□□ 1.15
CDR2-201ENST00000268383 NR5A2O00482 541 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 OR4Q2P0C623 313 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 NR1H2P55055 460 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 DSC2Q02487 901 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 KIF19Q2TAC6 998 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 HDAC10Q969S8 669 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 PABPC5Q96DU9 382 aaKnown RBP22.23■■□□□ 1.15
CDR2-201ENST00000268383 OLAHQ9NV23 265 aa22.23■■□□□ 1.15
CDR2-201ENST00000268383 SRP72O76094 671 aaKnown RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 CDK4P11802 303 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 HSPA13P48723 471 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 SLC10A7Q0GE19 358 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 VPS26BQ4G0F5 336 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 KRT80Q6KB66 452 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 ZNF354CQ86Y25 554 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 FAM81AQ8TBF8 368 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 NSUN5Q96P11 429 aaKnown RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 NMUR1Q9HB89 426 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 CSNK1G1Q9HCP0 422 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 RRN3Q9NYV6 651 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 DICER1Q9UPY3 1922 aaKnown RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 ARHGAP10A1A4S6 786 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 ITGB1P05556 798 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 GEN1Q17RS7 908 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 ZBTB49Q6ZSB9 765 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 PLEKHH3Q7Z736 793 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 TMEM86AQ8N2M4 240 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 DRAXINQ8NBI3 349 aaPredicted RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 NOL6Q9H6R4 1146 aaKnown RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 PLK2Q9NYY3 685 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 HS3ST4Q9Y661 456 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 A0A1B0GTL3 188 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 TCRBV3S1A0A5B6 114 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 C17orf102A2RUQ5 167 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 HTRA2O43464 458 aaPredicted RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 HAPLN1P10915 354 aaPredicted RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 DNAJB2P25686 324 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 SH3BP2P78314 561 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 AGMOQ6ZNB7 445 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 CARM1Q86X55 608 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 RANBP9Q96S59 729 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 AKTIPQ9H8T0 292 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 EML4Q9HC35 981 aaKnown RBP22.22■■□□□ 1.15
CDR2-201ENST00000268383 TMEM181Q9P2C4 612 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 VWA7Q9Y334 891 aa22.22■■□□□ 1.15
CDR2-201ENST00000268383 E9PAM4 449 aa22.21■■□□□ 1.15
CDR2-201ENST00000268383 SEC24DO94855 1032 aaPredicted RBP22.21■■□□□ 1.15
CDR2-201ENST00000268383 CLIC3O95833 236 aa22.21■■□□□ 1.15
CDR2-201ENST00000268383 PIRTP0C851 137 aa22.21■■□□□ 1.15
CDR2-201ENST00000268383 GRB7Q14451 532 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms