RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TBATAQ96M53 351 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 IL12RB2Q99665 862 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 MGME1Q9BQP7 344 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 APOOQ9BUR5 198 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 TCEAL2Q9H3H9 227 aaPredicted RBP16.16■□□□□ 0.18
USE1-201ENST00000263897 NHEJ1Q9H9Q4 299 aaPredicted RBP16.16■□□□□ 0.18
USE1-201ENST00000263897 USP29Q9HBJ7 922 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 SCUBE2Q9NQ36 999 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 SALL4Q9UJQ4 1053 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 U3KQA8 63 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 DMXL2Q8TDJ6 3036 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 ZZEF1O43149 2961 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 A8MX80 341 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 SOCS5O75159 536 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 GCATO75600 419 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 RECQL5O94762 991 aaPredicted RBP16.15■□□□□ 0.18
USE1-201ENST00000263897 MYF5P13349 255 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 MAN1A1P33908 653 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 GARSP41250 739 aaKnown RBP16.15■□□□□ 0.18
USE1-201ENST00000263897 MAXP61244 160 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 INSM1Q01101 510 aaPredicted RBP16.15■□□□□ 0.18
USE1-201ENST00000263897 GALNT2Q10471 571 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 MTM1Q13496 603 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 C1orf61Q13536 156 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 MESDQ14696 234 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 DEFB133Q30KQ1 61 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 PRRT3Q5FWE3 981 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 NCBP2-AS2Q69YL0 99 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 ZCCHC8Q6NZY4 707 aaKnown RBP16.15■□□□□ 0.18
USE1-201ENST00000263897 TEX26Q8N6G2 289 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 ZNF670Q9BS34 389 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 SLC13A1Q9BZW2 595 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 SPTLC3Q9NUV7 552 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 EVA1BQ9NVM1 165 aa16.15■□□□□ 0.18
USE1-201ENST00000263897 APOBEC3BQ9UH17 382 aaKnown RBP16.15■□□□□ 0.18
USE1-201ENST00000263897 LMO7DNF2Z398 122 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 MFSD11O43934 449 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 GP1BAP07359 652 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 ELFN1P0C7U0 828 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 GM2AP17900 193 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 CCNCP24863 283 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 HTR1BP28222 390 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 ARHGAP25P42331 645 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 BLKP51451 505 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 TBX2Q13207 712 aaPredicted RBP16.14■□□□□ 0.17
USE1-201ENST00000263897 ENPP7Q6UWV6 458 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 CBARPQ8N350 705 aaPredicted RBP16.14■□□□□ 0.17
USE1-201ENST00000263897 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 PLA2G15Q8NCC3 412 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 PDCD6IPQ8WUM4 868 aaKnown RBP16.14■□□□□ 0.17
USE1-201ENST00000263897 FAF2Q96CS3 445 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 TSGA13Q96PP4 275 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 CLPBQ9H078 707 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 NT5MQ9NPB1 228 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 NCKIPSDQ9NZQ3 722 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 B4GALT6Q9UBX8 382 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 PHTF1Q9UMS5 762 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 OR1A2Q9Y585 309 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 FAM208BQ5VWN6 2430 aa16.14■□□□□ 0.17
USE1-201ENST00000263897 DSPP15924 2871 aaKnown RBP16.13■□□□□ 0.17
USE1-201ENST00000263897 RP1P56715 2156 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 AKR1B15C9JRZ8 316 aaPredicted RBP16.13■□□□□ 0.17
USE1-201ENST00000263897 MATN3O15232 486 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 YY2O15391 372 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 OPA1O60313 960 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 MTA2O94776 668 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 MT-CO3P00414 261 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 ANXA6P08133 673 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 TSHRP16473 764 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 KDELR1P24390 212 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 TRIM23P36406 574 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 HK3P52790 923 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 TRAF2Q12933 501 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 NFATC4Q14934 902 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 ACOX1Q15067 660 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 IFI16Q16666 785 aaKnown RBP16.13■□□□□ 0.17
USE1-201ENST00000263897 ALG11Q2TAA5 492 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 HID1Q8IV36 788 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 CNGA4Q8IV77 575 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 RHOT2Q8IXI1 618 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 DCBLD1Q8N8Z6 715 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 RAPGEF5Q92565 580 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 MAML1Q92585 1016 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 FATE1Q969F0 183 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 TSACCQ96A04 125 aaPredicted RBP16.13■□□□□ 0.17
USE1-201ENST00000263897 SCRN2Q96FV2 425 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 RNF157Q96PX1 679 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 SEMA3CQ99985 751 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 LRRC61Q9BV99 259 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 BOCQ9BWV1 1114 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 CLCA2Q9UQC9 943 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 PPIL1Q9Y3C6 166 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 ASPMQ8IZT6 3477 aa16.13■□□□□ 0.17
USE1-201ENST00000263897 ZFYVE26Q68DK2 2539 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 RASGRP1O95267 797 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 PGLSO95336 258 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 MAP3K6O95382 1288 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 CPP00450 1065 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 PCCBP05166 539 aa16.12■□□□□ 0.17
USE1-201ENST00000263897 HOXC4P09017 264 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms