RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TARSP26639 723 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 HNF1BP35680 557 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 PSMD8P48556 350 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 TMPRSS15P98073 1019 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 CAMK2GQ13555 558 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 UBXN2BQ14CS0 331 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 PCID2Q5JVF3 399 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 CFAP58Q5T655 872 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 ESRP1Q6NXG1 681 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 TRMT10BQ6PF06 316 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 TMEM92Q6UXU6 159 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 TRMT10CQ7L0Y3 403 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 TSPAN33Q86UF1 283 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 RELL1Q8IUW5 271 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 MREGQ8N565 214 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 ZNF669Q96BR6 464 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 ECHDC3Q96DC8 303 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 MRRFQ96E11 262 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 ZNF641Q96N77 438 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 GABRG3Q99928 467 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 FUT8Q9BYC5 575 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 IL22Q9GZX6 179 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 PABPC3Q9H361 631 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 LMAN1LQ9HAT1 526 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 SAMD15Q9P1V8 674 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 WNT16Q9UBV4 365 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 SOX13Q9UN79 622 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 TCAF1Q9Y4C2 921 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 RPS6KL1Q9Y6S9 549 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 NUMA1Q14980 2115 aa9.78□□□□□ -0.84
SNRNP40-201ENST00000263694 DOCK9Q9BZ29 2069 aa9.77□□□□□ -0.84
SNRNP40-201ENST00000263694 NCOR1O75376 2440 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 A0A0J9YYE9 177 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 A0A1W2PQF6 199 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 NPIPB15A6NHN6 443 aaPredicted RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM170BA6NMN3 283 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 C16orf96A6NNT2 1141 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 GOLGA8KD6RF30 607 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 GOLGA8TH3BQL2 631 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 LDB2O43679 373 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 SYNCRIPO60506 623 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 CLDN7O95471 211 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 TRBC1P01850 177 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 VCANP13611 3396 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 ALADP13716 330 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 HOXB2P14652 356 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 PGAM1P18669 254 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 CA4P22748 312 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 ADRA1DP25100 572 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 COPAP53621 1224 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM193AP78312 1265 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 MRPS21P82921 87 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 CBLBQ13191 982 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 FZD5Q13467 585 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 ELAVL3Q14576 367 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 EFTUD2Q15029 972 aaKnown RBP eCLIP9.77□□□□□ -0.854e-9■■■□□ 16.7
SNRNP40-201ENST00000263694 ANKRD20A4Q4UJ75 823 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 ZNF805Q5CZA5 627 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 SDE2Q6IQ49 451 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 PARS2Q7L3T8 475 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 LYSMD3Q7Z3D4 306 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 TTC7BQ86TV6 843 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 PNPLA1Q8N8W4 532 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 TMIEQ8NEW7 156 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 PPHLN1Q8NEY8 458 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 OR13C4Q8NGS5 318 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 FBF1Q8TES7 1133 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 EID2BQ96D98 161 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 LRRC39Q96DD0 335 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 KIFC1Q9BW19 673 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 MKRN2Q9H000 416 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 SUDS3Q9H7L9 328 aaPredicted RBP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 BPIFA1Q9NP55 256 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 SLC17A6Q9P2U8 582 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 GGT7Q9UJ14 662 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 PHTF1Q9UMS5 762 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 PLAAQ9Y263 795 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 ITM2BQ9Y287 266 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 LRRK1Q38SD2 2015 aa9.77□□□□□ -0.85
SNRNP40-201ENST00000263694 ZCWPW2A0A1B0GU75 182 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM237BA0A1B0GVD1 139 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 TCRBV9S1A1TA0A576 114 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 KANSL1LA0AUZ9 987 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 OR51F1A6NGY5 319 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 SMIM23A6NLE4 172 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 CXorf49A8MYA2 514 aaPredicted RBP9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 STK25O00506 426 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 NPC1O15118 1278 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 MID1O15344 667 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 PRNPP04156 253 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 ERVK-10P10266 1014 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 GRIA4P48058 902 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 ARSDP51689 593 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 STARD6P59095 220 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 SATB1Q01826 763 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 PRKCQQ04759 706 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 GAS6Q14393 721 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 GRM3Q14832 879 aa9.76□□□□□ -0.85
SNRNP40-201ENST00000263694 CRYMQ14894 314 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms