RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ARMC12Q5T9G4 340 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 OTOP3Q7RTS5 596 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 C16orf62Q7Z3J2 963 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 SMYD1Q8NB12 490 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 SPACA7Q96KW9 195 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 GLT1D1Q96MS3 346 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 SERPINB11Q96P15 392 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 GAD1Q99259 594 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 KPNA3O00505 521 aaPredicted RBP12.1□□□□□ -0.47
SMG6-201ENST00000263073 AZIN1O14977 448 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 CD48P09326 243 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 PTPN1P18031 435 aaKnown RBP12.1□□□□□ -0.47
SMG6-201ENST00000263073 EPHB3P54753 998 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
SMG6-201ENST00000263073 XKR6Q5GH73 641 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 IRF2BP1Q8IU81 584 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 KBTBD8Q8NFY9 601 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 ZNF398Q8TD17 642 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 LPPQ93052 612 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 LINGO1Q96FE5 620 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 CADM1Q9BY67 442 aaKnown RBP12.1□□□□□ -0.47
SMG6-201ENST00000263073 KCNMB3Q9NPA1 279 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 SLC35C2Q9NQQ7 365 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 AP2A2O94973 939 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 EGFRP00533 1210 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 RCVRNP35243 200 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 PBX1P40424 430 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 SLC5A3P53794 718 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 CASP7P55210 303 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 TMEM132BQ14DG7 1078 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 C7orf57Q8NEG2 295 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 OR4A15Q8NGL6 344 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 RELTQ969Z4 430 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 TBATAQ96M53 351 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 SPATC1LQ9H0A9 340 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 NR2E1Q9Y466 385 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 ULK1O75385 1050 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 S100A9P06702 114 aaKnown RBP12.1□□□□□ -0.47
SMG6-201ENST00000263073 IFI30P13284 250 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 DGKAP23743 735 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 TTKP33981 857 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 AAGABQ6PD74 315 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 NAT16Q8N8M0 369 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 EEF1AKMT1Q8WVE0 214 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 S100ZQ8WXG8 99 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 NELL1Q92832 810 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 C1orf167Q5SNV9 1468 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 BIRC5O15392 142 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 BUD31P41223 144 aaPredicted RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 CNPY1Q3B7I2 92 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ZFP69Q49AA0 526 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 CCDC80Q76M96 950 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ANKS1BQ7Z6G8 1248 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 PLEKHH3Q7Z736 793 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ASB2Q96Q27 587 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SEMA3CQ99985 751 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 MRPL45Q9BRJ2 306 aaKnown RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 ING4Q9UNL4 249 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 PSMD13Q9UNM6 376 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 GPC6Q9Y625 555 aaPredicted RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 FRMPD1Q5SYB0 1578 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 RFXANKO14593 260 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 TM7SF2O76062 418 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ALDH2P05091 517 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 FGRP09769 529 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 TRAP1Q12931 704 aaKnown RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 DENND1CQ8IV53 801 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 TMEM161BQ8NDZ6 487 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 NXNL1Q96CM4 212 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SENP8Q96LD8 212 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 TRAF6Q9Y4K3 522 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 IQCF5A8MTL0 148 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 CASKO14936 926 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 PSMD10O75832 226 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 ANXA5P08758 320 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 NOS2P35228 1153 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SCNN1GP51170 649 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 RASSF6Q6ZTQ3 369 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 RNF180Q86T96 592 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 CBR4Q8N4T8 237 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 PIK3C3Q8NEB9 887 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 IL31RAQ8NI17 732 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 RAD51AP1Q96B01 352 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 GLIS2Q9BZE0 524 aaPredicted RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 TRPV5Q9NQA5 729 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 RPS6KA6Q9UK32 745 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 MEIS2O14770 477 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 NOBOXO60393 691 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 GUCY1B2O75343 617 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 SLC22A3O75751 556 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 LACTB2Q53H82 288 aaPredicted RBP12.09□□□□□ -0.47
SMG6-201ENST00000263073 ARSHQ5FYA8 562 aa12.09□□□□□ -0.47
SMG6-201ENST00000263073 REP15Q6BDI9 236 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms