RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 CNSTQ6PJW8 725 aa16.94■□□□□ 0.3
GAPDH-201ENST00000229239 TMC7Q7Z402 723 aa16.94■□□□□ 0.3
GAPDH-201ENST00000229239 HERC6Q8IVU3 1022 aa16.94■□□□□ 0.3
GAPDH-201ENST00000229239 AFAP1L2Q8N4X5 818 aa16.94■□□□□ 0.3
GAPDH-201ENST00000229239 TRMT2BQ96GJ1 504 aaKnown RBP16.94■□□□□ 0.3
GAPDH-201ENST00000229239 CNDP1Q96KN2 507 aa16.94■□□□□ 0.3
GAPDH-201ENST00000229239 PSKH2Q96QS6 385 aa16.94■□□□□ 0.3
GAPDH-201ENST00000229239 TRPM5Q9NZQ8 1165 aa16.94■□□□□ 0.3
GAPDH-201ENST00000229239 CHD7Q9P2D1 2997 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ILVBLA1L0T0 632 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 LDB2O43679 373 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 KDELR3O43731 214 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 DLX3O60479 287 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ENTPD5O75356 428 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 LTA4HP09960 611 aaKnown RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 MYOGP15173 224 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 HOXD9P28356 352 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 CPA2P48052 419 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 IHHQ14623 411 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 CMPK2Q5EBM0 449 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ARL13AQ5H913 290 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 KIAA1841Q6NSI8 718 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 FAM45BPQ6NSW5 357 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 RFWD3Q6PCD5 774 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ACAD11Q709F0 780 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 SLC22A9Q8IVM8 553 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ZNF461Q8TAF7 563 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 FAM45AQ8TCE6 357 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 BRSK1Q8TDC3 778 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 IGSF21Q96ID5 467 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 NKX2-4Q9H2Z4 354 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 POPDC3Q9HBV1 291 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 TCF7L2Q9NQB0 619 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 IGSF5Q9NSI5 407 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 MIA3Q5JRA6 1907 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 MYLKQ15746 1914 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 TRPC5OSA6NMA1 111 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ABLIM3O94929 683 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 PIGNO95427 931 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 NDST3O95803 873 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 GLDCP23378 1020 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 SLC6A4P31645 630 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 GLRBP48167 497 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 NAGLUP54802 743 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 DEFB103AP81534 67 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 NSUN2Q08J23 767 aaKnown RBP eCLIP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 GALNT1Q10472 559 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 DLG1Q12959 904 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 USP4Q13107 963 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 GRIN2CQ14957 1233 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ACAP2Q15057 778 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 HECTD2Q5U5R9 776 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 MRNIPQ6NTE8 343 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 HEXDCQ8WVB3 486 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 HDAC10Q969S8 669 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 MYEOVQ96EZ4 313 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 UBXN10Q96LJ8 280 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 EML4Q9HC35 981 aaKnown RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.93■□□□□ 0.31e-25■□□□□ 10.9
GAPDH-201ENST00000229239 UBA2Q9UBT2 640 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 NKX1-2Q9UD57 310 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 VWA7Q9Y334 891 aa16.93■□□□□ 0.3
GAPDH-201ENST00000229239 ZFP37Q9Y6Q3 630 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-201ENST00000229239 EYSQ5T1H1 3165 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 H3BNC9 293 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 ADAM12O43184 909 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 COCHO43405 550 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 RPP40O75818 363 aaKnown RBP16.92■□□□□ 0.3
GAPDH-201ENST00000229239 LATS1O95835 1130 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 S1PR4O95977 384 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 HMGA1P17096 107 aaKnown RBP16.92■□□□□ 0.3
GAPDH-201ENST00000229239 TFEBP19484 476 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 OGNP20774 298 aaKnown RBP16.92■□□□□ 0.3
GAPDH-201ENST00000229239 CPOXP36551 454 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 OXCT1P55809 520 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 PFKPQ01813 784 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 KPNB1Q14974 876 aaKnown RBP16.92■□□□□ 0.3
GAPDH-201ENST00000229239 TECRLQ5HYJ1 363 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 SH2D4BQ5SQS7 431 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 ZNF783Q6ZMS7 281 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 OR6P1Q8NGX9 317 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 GIMAP7Q8NHV1 300 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 TRMOQ9BU70 441 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 STX18Q9P2W9 335 aaKnown RBP16.92■□□□□ 0.3
GAPDH-201ENST00000229239 MAFFQ9ULX9 164 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 LRRC42Q9Y546 428 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 PTPRSQ13332 1948 aa16.92■□□□□ 0.3
GAPDH-201ENST00000229239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 A0A1B0GVM2 712 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 TCAF2A6NFQ2 919 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 WISP3O95389 354 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 CRTAMO95727 393 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 GLP2RO95838 553 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 SOD2P04179 222 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 NCF2P19878 526 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 MPSTP25325 297 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 ZNF177Q13360 481 aaPredicted RBP16.91■□□□□ 0.3
GAPDH-201ENST00000229239 ZNF460Q14592 562 aa16.91■□□□□ 0.3
GAPDH-201ENST00000229239 NAA25Q14CX7 972 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms