RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 UBFD1O14562 309 aaKnown RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 MSI1O43347 362 aaKnown RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 ATP6AP2O75787 350 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 PENKP01210 267 aaPredicted RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 PCSK6P29122 969 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 SLC7A1P30825 629 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 CYP2C18P33260 490 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 C6orf10Q5SRN2 563 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 HMBOX1Q6NT76 420 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 DRAXINQ8NBI3 349 aaPredicted RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 RTP3Q9BQQ7 232 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 SLC39A3Q9BRY0 314 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 TMEM79Q9BSE2 394 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 OSBPL11Q9BXB4 747 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 PRKD2Q9BZL6 878 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 CATSPERBQ9H7T0 1116 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 GMPR2Q9P2T1 348 aaKnown RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 TRAF6Q9Y4K3 522 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 CEPT1Q9Y6K0 416 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 HTTP42858 3142 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 H0YJX3 145 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 NRP2O60462 931 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 SRP72O76094 671 aaKnown RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 IGLV3-25P01717 112 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 RBP1P09455 135 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 PCSK1P29120 753 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 WNT3AP56704 352 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 TXNL4AP83876 142 aaKnown RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 ADRM1Q16186 407 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 TIGD5Q53EQ6 642 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 PITRM1Q5JRX3 1037 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 HECTD2Q5U5R9 776 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 GDF6Q6KF10 455 aaPredicted RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 TAF2Q6P1X5 1199 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 KIAA0408Q6ZU52 694 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 LZTR1Q8N653 840 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 TRIML2Q8N7C3 387 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 FAM81AQ8TBF8 368 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 RNF217Q8TC41 542 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 FCRL2Q96LA5 508 aaPredicted RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 ZNF512Q96ME7 567 aaPredicted RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 CCT7Q99832 543 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 SLC25A23Q9BV35 468 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 GSTO2Q9H4Y5 243 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 FBRSL1Q9HCM7 1045 aaKnown RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 MRGBPQ9NV56 204 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 TMLHEQ9NVH6 421 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 MPP6Q9NZW5 540 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 TMEM181Q9P2C4 612 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 CNOT6Q9ULM6 557 aaKnown RBP17.35■□□□□ 0.37
USB1-201ENST00000219281 TMCO1Q9UM00 188 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 PHF24Q9UPV7 400 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 MYLKQ15746 1914 aa17.34■□□□□ 0.37
USB1-201ENST00000219281 FGF10O15520 208 aaPredicted RBP17.34■□□□□ 0.37
USB1-201ENST00000219281 IRAK2O43187 625 aa17.34■□□□□ 0.37
USB1-201ENST00000219281 SLC5A2P31639 672 aa17.34■□□□□ 0.37
USB1-201ENST00000219281 LEPRP48357 1165 aaKnown RBP17.34■□□□□ 0.37
USB1-201ENST00000219281 ACAP2Q15057 778 aa17.34■□□□□ 0.37
USB1-201ENST00000219281 PAN2Q504Q3 1202 aaKnown RBP17.34■□□□□ 0.37
USB1-201ENST00000219281 LDB1Q86U70 411 aaPredicted RBP17.34■□□□□ 0.37
USB1-201ENST00000219281 PPWD1Q96BP3 646 aaKnown RBP17.34■□□□□ 0.37
USB1-201ENST00000219281 CAAP1Q9H8G2 361 aa17.34■□□□□ 0.37
USB1-201ENST00000219281 GABRQQ9UN88 632 aa17.34■□□□□ 0.37
USB1-201ENST00000219281 ST3GAL5Q9UNP4 418 aa17.34■□□□□ 0.37
USB1-201ENST00000219281 ZNF839A8K0R7 811 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 CHRNA1P02708 482 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 CYBAP13498 195 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 CLCN5P51795 746 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 SLC7A2P52569 658 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 USP46P62068 366 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 MRPS6P82932 125 aaKnown RBP17.33■□□□□ 0.37
USB1-201ENST00000219281 EIF4EBP2Q13542 120 aaPredicted RBP17.33■□□□□ 0.37
USB1-201ENST00000219281 TIGD7Q6NT04 549 aaPredicted RBP17.33■□□□□ 0.37
USB1-201ENST00000219281 BORAQ6PGQ7 559 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 CARM1Q86X55 608 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 GRIN3AQ8TCU5 1115 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 TRIB2Q92519 343 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 PBXIP1Q96AQ6 731 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 RANBP9Q96S59 729 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 HAUS8Q9BT25 410 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 ALG9Q9H6U8 611 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 TBC1D13Q9NVG8 400 aa17.33■□□□□ 0.37
USB1-201ENST00000219281 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.37
USB1-201ENST00000219281 HNRNPRO43390 633 aaKnown RBP17.33■□□□□ 0.36
USB1-201ENST00000219281 TIPRLO75663 272 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 SUPT7LO94864 414 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 MOCS2O96007 188 aaPredicted RBP17.33■□□□□ 0.36
USB1-201ENST00000219281 HOXC13P31276 330 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 KCNC1P48547 511 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 PGFP49763 221 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 SCNN1GP51170 649 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 SAMD4BQ5PRF9 694 aaKnown RBP17.33■□□□□ 0.36
USB1-201ENST00000219281 MANEALQ5VSG8 457 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 FAM45BPQ6NSW5 357 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 TMEM207Q6UWW9 146 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 CYHR1Q6ZMK1 362 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 DHFR2Q86XF0 187 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 SLC22A9Q8IVM8 553 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 FAM110BQ8TC76 370 aa17.33■□□□□ 0.36
USB1-201ENST00000219281 FAM45AQ8TCE6 357 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms