RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PITRM1Q5JRX3 1037 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF662Q6ZS27 426 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 NT5DC3Q86UY8 548 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 TRIM69Q86WT6 500 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 MMAAQ8IVH4 418 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 APCDD1Q8J025 514 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 LSMEM2Q8N112 164 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 TXLNBQ8N3L3 684 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 RTL3Q8N8U3 475 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 FIBINQ8TAL6 211 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 FAM71BQ8TC56 605 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 FRS2Q8WU20 508 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 ALG3Q92685 438 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 ALG14Q96F25 216 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 SERAC1Q96JX3 654 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 APOLD1Q96LR9 279 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 CSPG4P5Q96PW8 444 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 PSMB7Q99436 277 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 KLC2Q9H0B6 622 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 NOL6Q9H6R4 1146 aaKnown RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 AASDHPPTQ9NRN7 309 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 ETNK2Q9NVF9 386 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 TMEM248Q9NWD8 314 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 SLCO3A1Q9UIG8 710 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 SARDHQ9UL12 918 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 PACSIN2Q9UNF0 486 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-225ENST00000641720 SATB2Q9UPW6 733 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 TBC1D30Q9Y2I9 924 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 PCDHGA8Q9Y5G5 932 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 OR51B4Q9Y5P0 310 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 ADGRG4Q8IZF6 3080 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 ITPR3Q14573 2671 aa7.52□□□□□ -1.21
PHGDH-225ENST00000641720 A0A0D9SEW6 157 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 TARSL2A2RTX5 802 aaKnown RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 LRRD1A4D1F6 860 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 LRRC72A6NJI9 287 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 H3BRJ5 948 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 FGF10O15520 208 aaPredicted RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 KRT86O43790 486 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 MFSD11O43934 449 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 SNAP91O60641 907 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 KRT7P08729 469 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 ERCC2P18074 760 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 AMPD1P23109 780 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 IL4RP24394 825 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 SLC8A1P32418 973 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 HTR7P34969 479 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 CTNNA1P35221 906 aaKnown RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 ACVRL1P37023 503 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 MAPKAPK2P49137 400 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 DNA2P51530 1060 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 OVGP1Q12889 678 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 NFATC3Q12968 1075 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 ACBD5Q5T8D3 534 aaPredicted RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 LRRC38Q5VT99 294 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 RNF219Q5W0B1 726 aaPredicted RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 MFSD7Q6UXD7 560 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 GCNT7Q6ZNI0 430 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 TP53INP2Q8IXH6 220 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 RHOT1Q8IXI2 618 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 KATNAL2Q8IYT4 538 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 STK40Q8N2I9 435 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 RNF10Q8N5U6 811 aaKnown RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 PQLC3Q8N755 202 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 KCTD6Q8NC69 237 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 OR7D4Q8NG98 312 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 PCDH19Q8TAB3 1148 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 KIAA1524Q8TCG1 905 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 VOPP1Q96AW1 172 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 FAF2Q96CS3 445 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 HMCESQ96FZ2 354 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 ATXN7L3BQ96GX2 97 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 CALR3Q96L12 384 aaKnown RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 SEMA3CQ99985 751 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF670Q9BS34 389 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 HERPUD2Q9BSE4 406 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 FEM1AQ9BSK4 669 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 CALN1Q9BXU9 219 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 TRMT1Q9NXH9 659 aaKnown RBP7.51□□□□□ -1.21
PHGDH-225ENST00000641720 SUN2Q9UH99 717 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 DNAI1Q9UI46 699 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 VPS28Q9UK41 221 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 ACSL6Q9UKU0 697 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 PLA2G4CQ9UP65 541 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 ERVW-1Q9UQF0 538 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 PDZD2O15018 2839 aa7.51□□□□□ -1.21
PHGDH-225ENST00000641720 SETD2Q9BYW2 2564 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 ILVBLA1L0T0 632 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 WASH4PA8MWX3 477 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 DDX3YO15523 660 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 RAMP2O60895 175 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 RNASEH2AO75792 299 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 SRPRAP08240 638 aaKnown RBP7.5□□□□□ -1.21
PHGDH-225ENST00000641720 CR2P20023 1033 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 C5AR1P21730 350 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 KDELR1P24390 212 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 CTNNA2P26232 953 aa7.5□□□□□ -1.21
PHGDH-225ENST00000641720 OR1E1P30953 314 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms