RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 C2orf81A6NN90 581 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 UPK3BL1B0FP48 263 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 UPK3BL2E5RIL1 263 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 ZNF821O75541 412 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-218ENST00000641491 SEC31AO94979 1220 aaKnown RBP13.04□□□□□ -0.32
PHGDH-218ENST00000641491 CRTAMO95727 393 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 EPOP01588 193 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 OXTRP30559 389 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 SESN2P58004 480 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-218ENST00000641491 TRAF2Q12933 501 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 MTAPQ13126 283 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 HIF1AQ16665 826 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 MAP9Q49MG5 647 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 KIAA1211LQ6NV74 962 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 GLT6D1Q7Z4J2 308 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 PRPF39Q86UA1 669 aaKnown RBP13.04□□□□□ -0.32
PHGDH-218ENST00000641491 CCDC25Q86WR0 208 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 CAMKK1Q8N5S9 505 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 GABPB2Q8TAK5 448 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-218ENST00000641491 BLOC1S5Q8TDH9 187 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 OXNAD1Q96HP4 312 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-218ENST00000641491 APOL2Q9BQE5 337 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 GPR63Q9BZJ6 419 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 FOXP3Q9BZS1 431 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 PABPC3Q9H361 631 aaKnown RBP13.04□□□□□ -0.32
PHGDH-218ENST00000641491 FBXL12Q9NXK8 326 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 DKK3Q9UBP4 350 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 MAD1L1Q9Y6D9 718 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 COL4A2P08572 1712 aa13.04□□□□□ -0.32
PHGDH-218ENST00000641491 A0A1W2PP55 124 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 A0A1W2PQF6 199 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 LRRC72A6NJI9 287 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 H0Y858 1186 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 SLC7A4O43246 635 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 NDUFS2O75306 463 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 USP12O75317 370 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 GJB3O75712 270 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 PCDH8O95206 1070 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 AGTP01019 485 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 ELFN1P0C7U0 828 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 PAMP19021 973 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 NDUFV2P19404 249 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 RPL21P46778 160 aaKnown RBP13.03□□□□□ -0.32
PHGDH-218ENST00000641491 RPS14P62263 151 aaKnown RBP13.03□□□□□ -0.32
PHGDH-218ENST00000641491 KCNJ11Q14654 390 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 RNASEH2BQ5TBB1 312 aaKnown RBP13.03□□□□□ -0.32
PHGDH-218ENST00000641491 DUPD1Q68J44 220 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 CWF19L1Q69YN2 538 aaKnown RBP13.03□□□□□ -0.32
PHGDH-218ENST00000641491 KDELC1Q6UW63 502 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-218ENST00000641491 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 MCUQ8NE86 351 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 OR52K1Q8NGK4 314 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 OR14C36Q8NHC7 312 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 CPT1BQ92523 772 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 MRGPRX2Q96LB1 330 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 FMO2Q99518 471 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 C1QTNF7Q9BXJ2 289 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 HDAC8Q9BY41 377 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 IL22Q9GZX6 179 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 BTBD1Q9H0C5 482 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 TRABDQ9H4I3 376 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.03□□□□□ -0.32
PHGDH-218ENST00000641491 NEU2Q9Y3R4 380 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 PKP3Q9Y446 797 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 V9GYY5 206 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-218ENST00000641491 KMT2EQ8IZD2 1858 aa13.03□□□□□ -0.32
PHGDH-218ENST00000641491 MYO15AQ9UKN7 3530 aa13.02□□□□□ -0.32
PHGDH-218ENST00000641491 C1orf232A0A0U1RR37 186 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 HEATR9A2RTY3 570 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 FAM47DPA6NHR8 397 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 ANKRD66B4E2M5 251 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 MAP3K13O43283 966 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 HTRA2O43464 458 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-218ENST00000641491 ERLIN1O75477 346 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 SUN1O94901 812 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 PDGFBP01127 241 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-218ENST00000641491 CTSLP07711 333 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 MMP2P08253 660 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 MLNP12872 115 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 ADRB3P13945 408 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 CTPS1P17812 591 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 NPY2RP49146 381 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 COPAP53621 1224 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 DRG2P55039 364 aaKnown RBP13.02□□□□□ -0.33
PHGDH-218ENST00000641491 UGP2Q16851 508 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 BBS9Q3SYG4 887 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 USP39Q53GS9 565 aaKnown RBP13.02□□□□□ -0.33
PHGDH-218ENST00000641491 SIRPB2Q5JXA9 342 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 FAM182AQ5T1J6 154 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 DENND2CQ68D51 928 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 LRRC8BQ6P9F7 803 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
PHGDH-218ENST00000641491 PARS2Q7L3T8 475 aaKnown RBP13.02□□□□□ -0.33
PHGDH-218ENST00000641491 NLRP9Q7RTR0 991 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms