RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y MFHAS1Q9Y4C4 1052 aa16.34■□□□□ 0.21
CD99-211ENST00000623253_PAR_Y DAAM1Q9Y4D1 1078 aa16.34■□□□□ 0.21
CD99-211ENST00000623253_PAR_Y LOXL2Q9Y4K0 774 aa16.34■□□□□ 0.21
CD99-211ENST00000623253_PAR_Y RP1P56715 2156 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y C2CD4BA6NLJ0 364 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y NOBOXO60393 691 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y TNFP01375 233 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y KRT3P12035 628 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y MMP8P22894 467 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PTPN9P43378 593 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SUOXP51687 545 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y HDAC4P56524 1084 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y LINC00303Q3SY05 128 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y ERAP2Q6P179 960 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SCYL2Q6P3W7 929 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SLFN11Q7Z7L1 901 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CCNJLQ8IV13 435 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y RTL3Q8N8U3 475 aaKnown RBP16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y OR6C4Q8NGE1 309 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y WDR92Q96MX6 357 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PCDH12Q9NPG4 1184 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y COL6A6A6NMZ7 2263 aa16.33■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y RASA4BC9J798 803 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y RASA4O43374 803 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CREB3O43889 395 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CYP1A1P04798 512 aaPredicted RBP16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PRKCGP05129 697 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y LIPCP11150 499 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y ITIH1P19827 911 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CCKBRP32239 447 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y LIG3P49916 1009 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y NFKB2Q00653 900 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CDR2Q01850 454 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CYTH1Q15438 398 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y UGP2Q16851 508 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y KIF26BQ2KJY2 2108 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CT47A1Q5JQC4 288 aaPredicted RBP16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y EFHC2Q5JST6 749 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y MANEAQ5SRI9 462 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y TAF8Q7Z7C8 310 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y ZNF677Q86XU0 584 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y FAM46DQ8NEK8 389 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CENPIQ92674 756 aaPredicted RBP16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PDXPQ96GD0 296 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SELENOOQ9BVL4 669 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SUV39H2Q9H5I1 410 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SEPT10Q9P0V9 454 aa16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y NOCTQ9UK39 431 aaKnown RBP16.32■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PRAMEF33A0A0G2JMD5 474 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y NVLO15381 856 aaKnown RBP16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PRAMEF10O60809 474 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y GPD1P21695 349 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y RFC1P35251 1148 aaPredicted RBP16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CSRP3P50461 194 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y MAPK10P53779 464 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y YBEYP58557 167 aaPredicted RBP16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y FMO1Q01740 532 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y ARHGEF7Q14155 803 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y KCTD16Q68DU8 428 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y VASH2Q86V25 355 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y ZFAND4Q86XD8 727 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y NTAN1Q96AB6 310 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y LHX3Q9UBR4 397 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y UBA2Q9UBT2 640 aaPredicted RBP16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y MOSPD1Q9UJG1 213 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PCDHB11Q9Y5F2 797 aa16.31■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PIEZO2Q9H5I5 2752 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y MYO18BQ8IUG5 2567 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y B4DGG1 531 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CACNB4O00305 520 aaPredicted RBP16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y FAM87AP0C7U9 286 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y GLB1P16278 677 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CHRNB2P17787 502 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y NSFP46459 744 aaKnown RBP16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y MTM1Q13496 603 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SERINC3Q13530 473 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PARP15Q460N3 678 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PHF19Q5T6S3 580 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y WDR59Q6PJI9 974 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CAMK1DQ8IU85 385 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SFTPA2Q8IWL1 248 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y ZSCAN1Q8NBB4 408 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y PLA2G15Q8NCC3 412 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y GPR156Q8NFN8 814 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y HCAR2Q8TDS4 363 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y OR1E3Q8WZA6 343 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y USP7Q93009 1102 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y RBM15Q96T37 977 aaKnown RBP eCLIP16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CMKLR1Q99788 373 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y DPEP2Q9H4A9 486 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y CATSPERBQ9H7T0 1116 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y MRPL40Q9NQ50 206 aaKnown RBP16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y SAMSN1Q9NSI8 373 aaKnown RBP16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y TAB2Q9NYJ8 693 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y ADAM22Q9P0K1 906 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y LRIT1Q9P2V4 623 aa16.3■□□□□ 0.2
CD99-211ENST00000623253_PAR_Y IL17BQ9UHF5 180 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms