RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 DCTN2Q13561 401 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FSCN1Q16658 493 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 MTX3Q5HYI7 312 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PIWIL4Q7Z3Z4 852 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 SIAH1Q8IUQ4 282 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FAM9CQ8IZT9 166 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF781Q8N8C0 355 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 GLIS1Q8NBF1 620 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PPTC7Q8NI37 304 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 SLC35B2Q8TB61 432 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 GBA3Q9H227 469 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.39□□□□□ -1.072e-6■■■■□ 22.1
ALMS1-208ENST00000620466 RCOR3Q9P2K3 495 aaPredicted RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 UBA2Q9UBT2 640 aaPredicted RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 RSL24D1Q9UHA3 163 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FZD10Q9ULW2 581 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PPIEQ9UNP9 301 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 DMTF1Q9Y222 760 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 MANSC4A6NHS7 340 aaPredicted RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 RGS14O43566 566 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CABYRO75952 493 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 NUDT14O95848 222 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 C2P06681 752 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 NCF4Q15080 339 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FAM182AQ5T1J6 154 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 C6orf52Q5T4I8 152 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 STXBP5Q5T5C0 1151 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF544Q6NX49 715 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CUZD1Q86UP6 607 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FAM228AQ86W67 206 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF567Q8N184 647 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 STAG3L4Q8TBR4 150 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 SOCS4Q8WXH5 440 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 DDX1Q92499 740 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 TBCDQ9BTW9 1192 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PARVBQ9HBI1 364 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PNPLA3Q9NST1 481 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF536O15090 1300 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 A8MX80 341 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 OR56A5P0C7T3 313 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 POLR2EP19388 210 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PRDX6P30041 224 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 TCEAL1Q15170 157 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CACUL1Q86Y37 369 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FBXO30Q8TB52 745 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 SKA1Q96BD8 255 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 REPS1Q96D71 796 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 RHOJQ9H4E5 214 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CHRAC1Q9NRG0 131 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CNPP09543 421 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ATXN1P54253 815 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 NRLP54845 237 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 DPYSQ14117 519 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 GALNT3Q14435 633 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 GATAD2AQ86YP4 633 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CDK20Q8IZL9 346 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 LMO3Q8TAP4 145 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 LPIN3Q9BQK8 851 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 OSBPL6Q9BZF3 934 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FAM25AB3EWG3 89 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FAM25CB3EWG5 89 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 FAM25GB3EWG6 89 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 RGS5O15539 181 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ST13P50502 369 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 MRPS6P82932 125 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 TNK2Q07912 1038 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 RALGDSQ12967 914 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PCBP1Q15365 356 aaKnown RBP eCLIP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ACSBG2Q5FVE4 666 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 TRMT10BQ6PF06 316 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 SLC26A9Q7LBE3 791 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 DNAJC1Q96KC8 554 aaKnown RBP8.39□□□□□ -1.07
ALMS1-208ENST00000620466 TCF12Q99081 682 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 ADI1Q9BV57 179 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 PRRG3Q9BZD7 231 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 EBF2Q9HAK2 575 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 TMEM216Q9P0N5 145 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 SLC17A6Q9P2U8 582 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 SESN1Q9Y6P5 492 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 HOXC6P09630 235 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 HOXB8P17481 243 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PTPN9P43378 593 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 LIMK2P53671 638 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 OGDHQ02218 1023 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 GAD2Q05329 585 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 BNIP2Q12982 314 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MTA1Q13330 715 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ZIK1Q3SY52 487 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 C8orf59Q8N0T1 100 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TMEM132CQ8N3T6 1108 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 OR52K2Q8NGK3 314 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 AZIN2Q96A70 460 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 NXNL1Q96CM4 212 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 EBF4Q9BQW3 602 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TRIM8Q9BZR9 551 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ZYG11BQ9C0D3 744 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms