RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	TCAF2	A6NFQ2	919 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	ATP6AP2	O75787	350 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	IPO13	O94829	963 aa	Known RBP	11.27	□□□□□ -0.61
TP53-223	ENST00000618944	LTA4H	P09960	611 aa	Known RBP	11.27	□□□□□ -0.61
TP53-223	ENST00000618944	RHOQ	P17081	205 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	ACVRL1	P37023	503 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	ALDH1A3	P47895	512 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	LEPR	P48357	1165 aa	Known RBP	11.27	□□□□□ -0.61
TP53-223	ENST00000618944	HK2	P52789	917 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	PRAME	P78395	509 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	MED21	Q13503	144 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	PIGG	Q5H8A4	983 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	CLLU1OS	Q5K130	101 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	CLEC6A	Q6EIG7	209 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	CILP2	Q8IUL8	1156 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	ZNF683	Q8IZ20	524 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	UMODL1-AS1	Q8N2C9	162 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.27	□□□□□ -0.61
TP53-223	ENST00000618944	CEP70	Q8NHQ1	597 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	SPPL2B	Q8TCT7	592 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	BLOC1S5	Q8TDH9	187 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.27	□□□□□ -0.61
TP53-223	ENST00000618944	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.27	□□□□□ -0.61
TP53-223	ENST00000618944	ADA2	Q9NZK5	511 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	PRPF19	Q9UMS4	504 aa	Known RBP	11.27	□□□□□ -0.61
TP53-223	ENST00000618944	ACTL7A	Q9Y615	435 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	ZNF236	Q9UL36	1845 aa		11.27	□□□□□ -0.61
TP53-223	ENST00000618944	TRPC5OS	A6NMA1	111 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	WASH4P	A8MWX3	477 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	UQCRB	P14927	111 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	ELN	P15502	786 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	NDST2	P52849	883 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	DNAJB13	P59910	316 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	POLD3	Q15054	466 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	C10orf120	Q5SQS8	335 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	RGMB	Q6NW40	437 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	KLC3	Q6P597	504 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	CUZD1	Q86UP6	607 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	LRRC49	Q8IUZ0	686 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	DCP1B	Q8IZD4	617 aa	Known RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	CFAP52	Q8N1V2	620 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	OR52K2	Q8NGK3	314 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	TBATA	Q96M53	351 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	RPRD1A	Q96P16	312 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	GBP5	Q96PP8	586 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	PPP1R2P1	Q96PQ5	205 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	UPF3A	Q9H1J1	476 aa	Known RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	VCX3B	Q9H321	246 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	ARNT2	Q9HBZ2	717 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	TRPC7	Q9HCX4	862 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	ATP13A1	Q9HD20	1204 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	CCDC167	Q9P0B6	97 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	ASB3	Q9Y575	518 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	ARL5A	Q9Y689	179 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	SLC12A8	A0AV02	714 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	UBFD1	O14562	309 aa	Known RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	TRPA1	O75762	1119 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	SUPT7L	O94864	414 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	S1PR4	O95977	384 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	DNAJB1	P25685	340 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	OR1E1	P30953	314 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	KPNA2	P52292	529 aa	Known RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	CDH13	P55290	713 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	PFKP	Q01813	784 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	PRKCZ	Q05513	592 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	VARS2	Q5ST30	1063 aa	Known RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	RASIP1	Q5U651	963 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	KIAA0408	Q6ZU52	694 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	PGAM4	Q8N0Y7	254 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	PQLC1	Q8N2U9	271 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	ICA1L	Q8NDH6	482 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-223	ENST00000618944	CALML6	Q8TD86	181 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	FBXO32	Q969P5	355 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	SEMA3C	Q99985	751 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	TMEM248	Q9NWD8	314 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	DTNA	Q9Y4J8	743 aa		11.26	□□□□□ -0.61
TP53-223	ENST00000618944	ARHGEF37	A1IGU5	675 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	MUSK	O15146	869 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	GPC4	O75487	556 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	OAZ2	O95190	189 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	PRSS56	P0CW18	603 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	SLC2A3	P11169	496 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	ME2	P23368	584 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	YWHAQ	P27348	245 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	CLCN5	P51795	746 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	POLE2	P56282	527 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	FOLH1	Q04609	750 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	TAF10	Q12962	218 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	GALNT3	Q14435	633 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	CTXN3	Q4LDR2	81 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	AGK	Q53H12	422 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	FBXL19	Q6PCT2	694 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	LAYN	Q6UX15	382 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	SETD3	Q86TU7	594 aa	Predicted RBP	11.25	□□□□□ -0.61
TP53-223	ENST00000618944	SAPCD2	Q86UD0	394 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	SPATA24	Q86W54	205 aa		11.25	□□□□□ -0.61
TP53-223	ENST00000618944	COLGALT2	Q8IYK4	626 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms