RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TDRD6O60522 2096 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 IGHV1OR21-1A0A087WYE8 117 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 RNF103O00237 685 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ACTN4O43707 911 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 CD160O95971 181 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 PAK4O96013 591 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 FGF1P05230 155 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 CELA2BP08218 269 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 FGF5P12034 268 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 CSTF2P33240 577 aaKnown RBP eCLIP4.61□□□□□ -1.67
SNCA-213ENST00000618500 CLCN1P35523 988 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 MMP12P39900 470 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 GCLMP48507 274 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 SNRPD1P62314 119 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 ARF5P84085 180 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ZC3H12AQ5D1E8 599 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 ZNF542PQ5EBM4 170 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ZRANB3Q5FWF4 1079 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 TMCO4Q5TGY1 634 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 OTUD1Q5VV17 481 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 AFMIDQ63HM1 303 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 SHC4Q6S5L8 630 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 GDPD4Q6W3E5 623 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ENOSF1Q7L5Y1 443 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 SLC26A9Q7LBE3 791 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 PRSS42Q7Z5A4 293 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 SYVN1Q86TM6 617 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 NRROSQ86YC3 692 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 IRF2BP1Q8IU81 584 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 IL22RA1Q8N6P7 574 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ST6GALNAC3Q8NDV1 305 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 OR2AP1Q8NGE2 309 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 TFAP2BQ92481 460 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ZSWIM1Q9BR11 485 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 TEX101Q9BY14 249 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 RAB33BQ9H082 229 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 METTL14Q9HCE5 456 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 SLC39A2Q9NP94 309 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 XPO7Q9UIA9 1087 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 B3GALT1Q9Y5Z6 326 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 FBN2P35556 2912 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 LILRA5A6NI73 299 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 WASH4PA8MWX3 477 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 M0QYV0 167 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 PSMD11O00231 422 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ENDOD1O94919 500 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 CBX6O95503 412 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 CENPBP07199 599 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 RAB40ALP0C0E4 278 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 MYCLP1P12525 358 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 CCNB1P14635 433 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 SLC2A4P14672 509 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 NR2F2P24468 414 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 CSF2RBP32927 897 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 HTR7P34969 479 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 DPYDQ12882 1025 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ARHGEF7Q14155 803 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 NAA30Q147X3 362 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 ZRSR2Q15696 482 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 ARHGAP44Q17R89 818 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 MYLK3Q32MK0 819 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ACCSLQ4AC99 568 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.61□□□□□ -1.67
SNCA-213ENST00000618500 PHF19Q5T6S3 580 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 BRAT1Q6PJG6 821 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 IGFL3Q6UXB1 125 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 CARFQ8N187 725 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ACBD4Q8NC06 268 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 CLEC4CQ8WTT0 213 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 KLK6Q92876 244 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ZNF396Q96N95 335 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 RPRD1AQ96P16 312 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 NPY6RQ99463 290 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 SMAD5Q99717 465 aaKnown RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 MUC3BQ9H195 1237 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 MAGEH1Q9H213 219 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 FAM204AQ9H8W3 233 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 NPDC1Q9NQX5 325 aaPredicted RBP4.61□□□□□ -1.67
SNCA-213ENST00000618500 TMEM248Q9NWD8 314 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 ZNHIT2Q9UHR6 403 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 TLK1Q9UKI8 766 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 PCDHGA10Q9Y5H3 936 aa4.61□□□□□ -1.67
SNCA-213ENST00000618500 NAV2Q8IVL1 2488 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 CACNB4O00305 520 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 SPTLC2O15270 562 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 NKX2-8O15522 239 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 SMAD6O43541 496 aaKnown RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 IGHEP01854 428 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 PYGLP06737 847 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 EPB41P11171 864 aaKnown RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 CCL4P13236 92 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 LPOP22079 712 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 NFKBIAP25963 317 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 ERCC5P28715 1186 aaPredicted RBP4.6□□□□□ -1.67
SNCA-213ENST00000618500 FOXM1Q08050 763 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 STK4Q13043 487 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 ART3Q13508 389 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 CUL4BQ13620 913 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 LRP8Q14114 963 aa4.6□□□□□ -1.67
SNCA-213ENST00000618500 CHRNA6Q15825 494 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms