RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 ARMC12Q5T9G4 340 aa32.04■■■□□ 2.72
FMR1-216ENST00000616614 SLC6A18Q96N87 628 aa32.04■■■□□ 2.72
FMR1-216ENST00000616614 WRAP53Q9BUR4 548 aaKnown RBP32.04■■■□□ 2.72
FMR1-216ENST00000616614 RXFP3Q9NSD7 469 aa32.04■■■□□ 2.72
FMR1-216ENST00000616614 KLHL8Q9P2G9 620 aaPredicted RBP32.04■■■□□ 2.72
FMR1-216ENST00000616614 SLC31A1O15431 190 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 KCNN4O15554 427 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 CEP104O60308 925 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 MMP20O60882 483 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 CPP00450 1065 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 NFKB1P19838 968 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 MMP12P39900 470 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 DPP6P42658 865 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 POLR2LP62875 67 aaKnown RBP32.03■■■□□ 2.72
FMR1-216ENST00000616614 RPS21P63220 83 aaKnown RBP32.03■■■□□ 2.72
FMR1-216ENST00000616614 RALGDSQ12967 914 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 DUOXA1Q1HG43 343 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 KIAA1161Q6NSJ0 714 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 SLC23A3Q6PIS1 610 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 PID1Q7Z2X4 250 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 PAF1Q8N7H5 531 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 VAT1Q99536 393 aa32.03■■■□□ 2.72
FMR1-216ENST00000616614 A0A1B0GTW7 788 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 MT-CYBP00156 380 aaPredicted RBP32.02■■■□□ 2.72
FMR1-216ENST00000616614 FGGP02679 453 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 FAM193AP78312 1265 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 LAYNQ6UX15 382 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 C1orf54Q8WWF1 131 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 C1QTNF2Q9BXJ5 285 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 SLC17A9Q9BYT1 436 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 CAPN10Q9HC96 672 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 TPX2Q9ULW0 747 aaKnown RBP32.02■■■□□ 2.72
FMR1-216ENST00000616614 PHTF1Q9UMS5 762 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 CA5BQ9Y2D0 317 aa32.02■■■□□ 2.72
FMR1-216ENST00000616614 DYNC1LI1Q9Y6G9 523 aaKnown RBP32.02■■■□□ 2.72
FMR1-216ENST00000616614 RIF1Q5UIP0 2472 aaKnown RBP32.02■■■□□ 2.72
FMR1-216ENST00000616614 A0A1W2PQ67 120 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 A8MX80 341 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 F5H423 210 aaPredicted RBP32.01■■■□□ 2.72
FMR1-216ENST00000616614 PAK4O96013 591 aaPredicted RBP32.01■■■□□ 2.72
FMR1-216ENST00000616614 CFIP05156 583 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 GNSP15586 552 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 ELP6Q0PNE2 266 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 ERAP2Q6P179 960 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 PRR23CQ6ZRP0 262 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 CEP76Q8TAP6 659 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 SERAC1Q96JX3 654 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 WDR24Q96S15 920 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 FZD3Q9NPG1 666 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 KCND1Q9NSA2 647 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 UBP1Q9NZI7 540 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 B4GALT6Q9UBX8 382 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 SUSD2Q9UGT4 822 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 TRHDEQ9UKU6 1024 aa32.01■■■□□ 2.72
FMR1-216ENST00000616614 LAMA1P25391 3075 aa32.01■■■□□ 2.71
FMR1-216ENST00000616614 KHNYNO15037 678 aaKnown RBP32■■■□□ 2.71
FMR1-216ENST00000616614 LIASO43766 372 aa32■■■□□ 2.71
FMR1-216ENST00000616614 CTPS1P17812 591 aa32■■■□□ 2.71
FMR1-216ENST00000616614 CSNK1EP49674 416 aaKnown RBP32■■■□□ 2.71
FMR1-216ENST00000616614 GDF10P55107 478 aa32■■■□□ 2.71
FMR1-216ENST00000616614 SETMARQ53H47 684 aaPredicted RBP32■■■□□ 2.71
FMR1-216ENST00000616614 KIAA2013Q8IYS2 634 aa32■■■□□ 2.71
FMR1-216ENST00000616614 MS4A14Q96JA4 679 aa32■■■□□ 2.71
FMR1-216ENST00000616614 MYOCQ99972 504 aa32■■■□□ 2.71
FMR1-216ENST00000616614 GORASP1Q9BQQ3 440 aa32■■■□□ 2.71
FMR1-216ENST00000616614 PCDH9Q9HC56 1237 aa32■■■□□ 2.71
FMR1-216ENST00000616614 SLC6A14Q9UN76 642 aa32■■■□□ 2.71
FMR1-216ENST00000616614 PPIL1Q9Y3C6 166 aa32■■■□□ 2.71
FMR1-216ENST00000616614 RAD51BO15315 384 aa32■■■□□ 2.71
FMR1-216ENST00000616614 WNT1P04628 370 aa32■■■□□ 2.71
FMR1-216ENST00000616614 GNG11P61952 73 aa32■■■□□ 2.71
FMR1-216ENST00000616614 RACK1P63244 317 aaKnown RBP32■■■□□ 2.71
FMR1-216ENST00000616614 BNC1Q01954 994 aa32■■■□□ 2.71
FMR1-216ENST00000616614 FAM71DQ8N9W8 422 aa32■■■□□ 2.71
FMR1-216ENST00000616614 CCDC110Q8TBZ0 833 aa32■■■□□ 2.71
FMR1-216ENST00000616614 CXorf40AQ8TE69 158 aa32■■■□□ 2.71
FMR1-216ENST00000616614 COG1Q8WTW3 980 aa32■■■□□ 2.71
FMR1-216ENST00000616614 OXNAD1Q96HP4 312 aaPredicted RBP32■■■□□ 2.71
FMR1-216ENST00000616614 TRIB3Q96RU7 358 aa32■■■□□ 2.71
FMR1-216ENST00000616614 TMEM121Q9BTD3 319 aa32■■■□□ 2.71
FMR1-216ENST00000616614 DMTF1Q9Y222 760 aa32■■■□□ 2.71
FMR1-216ENST00000616614 COQ6Q9Y2Z9 468 aa32■■■□□ 2.71
FMR1-216ENST00000616614 A0A0U1RQS6 177 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 ALPIP09923 528 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 LIG3P49916 1009 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 OASLQ15646 514 aaKnown RBP31.99■■■□□ 2.71
FMR1-216ENST00000616614 ANKRD20A2Q5SQ80 823 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 ANKRD20A1Q5TYW2 823 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 ANKRD20A3Q5VUR7 823 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 NAPEPLDQ6IQ20 393 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 DPPA4Q7L190 304 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 KDELC2Q7Z4H8 507 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 RASGEF1CQ8N431 466 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 TMEM145Q8NBT3 493 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 SCRN2Q96FV2 425 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 FCRL5Q96RD9 977 aa31.99■■■□□ 2.71
FMR1-216ENST00000616614 MCCC1Q96RQ3 725 aaPredicted RBP31.99■■■□□ 2.71
FMR1-216ENST00000616614 A0A1W2PR77 199 aa31.98■■■□□ 2.71
FMR1-216ENST00000616614 LNP1A1A4G5 178 aa31.98■■■□□ 2.71
FMR1-216ENST00000616614 HOXD11P31277 338 aaPredicted RBP31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms