RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 VAPBO95292 243 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 EPHA3P29320 983 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 SERPINB5P36952 375 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 WDR5P61964 334 aaKnown RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 POU6F1Q14863 301 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 KIAA0930Q6ICG6 404 aaPredicted RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 TIGD7Q6NT04 549 aaPredicted RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 OTOP2Q7RTS6 562 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 LRRC49Q8IUZ0 686 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 CEP97Q8IW35 865 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 MFSD6LQ8IWD5 586 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 DENND6AQ8IWF6 608 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 C2CD4AQ8NCU7 369 aaPredicted RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 PHC3Q8NDX5 983 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 IPMKQ8NFU5 416 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 FICDQ9BVA6 458 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 MRPL46Q9H2W6 279 aaKnown RBP14.81□□□□□ -0.04
CDH1-213ENST00000612417 EBF3Q9H4W6 596 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 SLC24A3Q9HC58 644 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 ETAA1Q9NY74 926 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 GMIPQ9P107 970 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 XPR1Q9UBH6 696 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 CDYLQ9Y232 598 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 LTBP2Q14767 1821 aa14.81□□□□□ -0.04
CDH1-213ENST00000612417 LAMA2P24043 3122 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 A0A087X1B8 175 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 MAP3K13O43283 966 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 MSI1O43347 362 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 PAGE1O75459 146 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 PAMP19021 973 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 YWHAQP27348 245 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 CCR1P32246 355 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 OR1D2P34982 312 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 GLRBP48167 497 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 NUDT2P50583 147 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 KPNA2P52292 529 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 DNAJB13P59910 316 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 MPP1Q00013 466 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 NRG1Q02297 640 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 CYLC2Q14093 348 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 PPP2R5DQ14738 602 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 TSTD2Q5T7W7 516 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 RNF220Q5VTB9 566 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 ESRP1Q6NXG1 681 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 RANBP10Q6VN20 620 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 SNX32Q86XE0 403 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 ARHGAP18Q8N392 663 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 GIPC2Q8TF65 315 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 GDPD5Q8WTR4 605 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 CASP10Q92851 521 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 FBXO32Q969P5 355 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 TMEM169Q96HH4 297 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 TSC22D3Q99576 134 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 VN1R3Q9BXE9 311 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 PRKD2Q9BZL6 878 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 SLC39A8Q9C0K1 460 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 SIK2Q9H0K1 926 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 CRISPLD1Q9H336 500 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 ZBTB26Q9HCK0 441 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 FNIP2Q9P278 1114 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 CCDC78A2IDD5 438 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 ADAM12O43184 909 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 EFCAB14O75071 495 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 RTN3O95197 1032 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 HLA-DQB2P05538 268 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 UBTFL6P0CB48 400 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 HSPA1AP0DMV8 641 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 HSPA1BP0DMV9 641 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 HAPLN1P10915 354 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 UQCRBP14927 111 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 SAT1P21673 171 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 PEX2P28328 305 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 AVPR1AP37288 418 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 PEX19P40855 299 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 SLC1A2P43004 574 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 CCR10P46092 362 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 CTBP1Q13363 440 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 MSLNQ13421 630 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 RFTN1Q14699 578 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 SFT2D3Q587I9 215 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 PIGGQ5H8A4 983 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 FOXB2Q5VYV0 432 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 AP1ARQ63HQ0 302 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 KIAA0408Q6ZU52 694 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 PIWIL4Q7Z3Z4 852 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 TMEM126BQ8IUX1 230 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 DSELQ8IZU8 1212 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 KDM1BQ8NB78 822 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 C2orf15Q8WU43 125 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 ZNF689Q96CS4 500 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 MAELQ96JY0 434 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 BTBD9Q96Q07 612 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 YME1L1Q96TA2 773 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 MRPL57Q9BQC6 102 aaKnown RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 NUF2Q9BZD4 464 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 OSER1Q9NX31 292 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 C6orf203Q9P0P8 240 aaPredicted RBP14.8□□□□□ -0.04
CDH1-213ENST00000612417 PSMD13Q9UNM6 376 aa14.8□□□□□ -0.04
CDH1-213ENST00000612417 ZBBXA8MT70 800 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 NEMP1O14524 444 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms