RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 TPI1P60174 286 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 SERINC3Q13530 473 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 INPP5AQ14642 412 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 KRT31Q15323 416 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 ERAP2Q6P179 960 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 GKN2Q86XP6 184 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 FBXO39Q8N4B4 442 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 CASKIN2Q8WXE0 1202 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 TTC9Q92623 222 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 EDEM3Q9BZQ6 932 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 STRADBQ9C0K7 418 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 RETREG1Q9H6L5 497 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 CATSPERBQ9H7T0 1116 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 DKK3Q9UBP4 350 aa13.47□□□□□ -0.25
HMGB1P24-201ENST00000611897 MYO18BQ8IUG5 2567 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 ARHGEF17Q96PE2 2063 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 CXorf51AA0A1B0GTR3 108 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 B4DGG1 531 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 K7ENP7 123 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 SLC28A2O43868 658 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 ITGA2BP08514 1039 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 JMJD7P0C870 316 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 UNGP13051 313 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 SLC5A2P31639 672 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 LIG3P49916 1009 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 INHBCP55103 352 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 JAM2P57087 298 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 SRSF6Q13247 344 aaKnown RBP13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 CYTH1Q15438 398 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 TGIF1Q15583 401 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 UGP2Q16851 508 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 PARP15Q460N3 678 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 TMEM52BQ4KMG9 183 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 INO80CQ6PI98 192 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 IGF2-ASQ6U949 168 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 PRICKLE2Q7Z3G6 844 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 DNAAF5Q86Y56 855 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 CAMK1DQ8IU85 385 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 C3orf20Q8ND61 904 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 CENPIQ92674 756 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 TBATAQ96M53 351 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 WDR92Q96MX6 357 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 CCNL2Q96S94 520 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 APOOQ9BUR5 198 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 ATXN7L1Q9ULK2 861 aaPredicted RBP13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 ATP8A1Q9Y2Q0 1164 aa13.46□□□□□ -0.25
HMGB1P24-201ENST00000611897 A8MX80 341 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 J3KR12 359 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 TOR1BO14657 336 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 DESP17661 470 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 UGT1A5P35504 534 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 MMP12P39900 470 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 YBEYP58557 167 aaPredicted RBP13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 RPL7AP62424 266 aaKnown RBP13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 SKOR1P84550 965 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 INO80DQ53TQ3 878 aaPredicted RBP13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 MON1BQ7L1V2 547 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 TAF8Q7Z7C8 310 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 CLEC14AQ86T13 490 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 ZSWIM9Q86XI8 627 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 CCNJLQ8IV13 435 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 SFTPA2Q8IWL1 248 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 FAM46DQ8NEK8 389 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 NEK11Q8NG66 645 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 ATL2Q8NHH9 583 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 OR1E3Q8WZA6 343 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 LIN37Q96GY3 246 aaPredicted RBP13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 FZD10Q9ULW2 581 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 MFHAS1Q9Y4C4 1052 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 SCN8AQ9UQD0 1980 aa13.45□□□□□ -0.26
HMGB1P24-201ENST00000611897 A0A1W2PQM1 296 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 CACNB4O00305 520 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 NTN3O00634 580 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 FGF10O15520 208 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 DAPK3O43293 454 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 TNFP01375 233 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 ELFN1P0C7U0 828 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 ITIH1P19827 911 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 SERPINA4P29622 427 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 MLLT3P42568 568 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 RGRP47804 291 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 PEX5P50542 639 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 ZNF143P52747 638 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 MAPK10P53779 464 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 NFATC3Q12968 1075 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 MTM1Q13496 603 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 MAP9Q49MG5 647 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 PHF19Q5T6S3 580 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms