RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 IMP4Q96G21 291 aaKnown RBP11.65□□□□□ -0.54
ZNF548-211ENST00000600927 GORASP1Q9BQQ3 440 aa11.65□□□□□ -0.54
ZNF548-211ENST00000600927 WDR83Q9BRX9 315 aaKnown RBP11.65□□□□□ -0.54
ZNF548-211ENST00000600927 CENPHQ9H3R5 247 aa11.65□□□□□ -0.54
ZNF548-211ENST00000600927 MRM3Q9HC36 420 aaKnown RBP11.65□□□□□ -0.54
ZNF548-211ENST00000600927 SSU72Q9NP77 194 aaKnown RBP11.65□□□□□ -0.54
ZNF548-211ENST00000600927 ZDHHC4Q9NPG8 344 aa11.65□□□□□ -0.54
ZNF548-211ENST00000600927 BCCIPQ9P287 314 aaKnown RBP eCLIP11.65□□□□□ -0.54
ZNF548-211ENST00000600927 CHMP2BQ9UQN3 213 aa11.65□□□□□ -0.54
ZNF548-211ENST00000600927 RIF1Q5UIP0 2472 aaKnown RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 IQANK1A0A1B0GTG1 560 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 FAM237BA0A1B0GVD1 139 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 NPC1O15118 1278 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 AXIN1O15169 862 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SHOX2O60902 331 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 AVILO75366 819 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 USP1O94782 785 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 C7P10643 843 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 NTSR1P30989 418 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 ADRA1AP35348 466 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 MSH2P43246 934 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 PXNP49023 591 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SERPINB9P50453 376 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SLC20A2Q08357 652 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 NSUN2Q08J23 767 aaKnown RBP eCLIP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SRSF5Q13243 272 aaKnown RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 KCTD16Q68DU8 428 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 RFWD3Q6PCD5 774 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 RANBP10Q6VN20 620 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 ARHGAP36Q6ZRI8 547 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SLC26A11Q86WA9 606 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 LRRC6Q86X45 466 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 IGDCC3Q8IVU1 814 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 TAB3Q8N5C8 712 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 MDGA1Q8NFP4 955 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 TSTD1Q8NFU3 115 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 UHMK1Q8TAS1 419 aaKnown RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 EPS8L3Q8TE67 593 aaKnown RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 LRRN4Q8WUT4 740 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SLC44A1Q8WWI5 657 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 CDKL2Q92772 493 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 PEX13Q92968 403 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 PSKH2Q96QS6 385 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 ACOX2Q99424 681 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 MLPHQ9BV36 600 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 POLR1EQ9GZS1 481 aaKnown RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 PDFQ9HBH1 243 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SAMD15Q9P1V8 674 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 THAP10Q9P2Z0 257 aaPredicted RBP11.64□□□□□ -0.55
ZNF548-211ENST00000600927 SEPT3Q9UH03 358 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 IKBKGQ9Y6K9 419 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 FAM169AQ9Y6X4 670 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 DNAH14Q0VDD8 3507 aa11.64□□□□□ -0.55
ZNF548-211ENST00000600927 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 PLXND1Q9Y4D7 1925 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 FAM159BA6NKW6 160 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 J3KR12 359 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 TSPAN3O60637 253 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 C1QAP02745 245 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 HLA-DQB2P05538 268 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 RHOCP08134 193 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 GCAP28676 217 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 IRAK1P51617 712 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 PLK1P53350 603 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 RPS24P62847 133 aaKnown RBP11.63□□□□□ -0.55
ZNF548-211ENST00000600927 PCID2Q5JVF3 399 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 LAIR1Q6GTX8 287 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 UNC5AQ6ZN44 842 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 ADIPOR2Q86V24 386 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 EXOC3L1Q86VI1 746 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 AGGF1Q8N302 714 aaeCLIP11.63□□□□□ -0.55
ZNF548-211ENST00000600927 DNAAF3Q8N9W5 541 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 MTBPQ96DY7 904 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 OXNAD1Q96HP4 312 aaPredicted RBP11.63□□□□□ -0.55
ZNF548-211ENST00000600927 ZC3H10Q96K80 434 aaKnown RBP11.63□□□□□ -0.55
ZNF548-211ENST00000600927 RANBP9Q96S59 729 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 TBL1YQ9BQ87 522 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 KIFC1Q9BW19 673 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 CAPS2Q9BXY5 557 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 ATP13A1Q9HD20 1204 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 ELOVL2Q9NXB9 296 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 NSMCE4AQ9NXX6 385 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 SOX13Q9UN79 622 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 MAD1L1Q9Y6D9 718 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 FAM186AA6NE01 2351 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 ATG2BQ96BY7 2078 aa11.63□□□□□ -0.55
ZNF548-211ENST00000600927 CHD5Q8TDI0 1954 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 LOC285095A0A1B0GVY8 99 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 POC1B-GALNT4F8VUJ3 575 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 TBL1XO60907 577 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 RPP40O75818 363 aaKnown RBP11.62□□□□□ -0.55
ZNF548-211ENST00000600927 LUC7L3O95232 432 aaKnown RBP11.62□□□□□ -0.55
ZNF548-211ENST00000600927 INHBAP08476 426 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 HOXB2P14652 356 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 TGM1P22735 817 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 CD70P32970 193 aa11.62□□□□□ -0.55
ZNF548-211ENST00000600927 MDH1P40925 334 aaKnown RBP11.62□□□□□ -0.55
ZNF548-211ENST00000600927 GRIA1P42261 906 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms