RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 THAP1Q9NVV9 213 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 MARCH4Q9P2E8 410 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 TLK1Q9UKI8 766 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 TRIM33Q9UPN9 1127 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 SSX2IPQ9Y2D8 614 aa17.15■□□□□ 0.34
SHKBP1-216ENST00000598201 HIDE1A8MVS5 230 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 INSIG1O15503 277 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 DNAJC6O75061 913 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 NDST3O95803 873 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 KITP10721 976 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 RBM20Q5T481 1227 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 LDB1Q86U70 411 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 CENPLQ8N0S6 344 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 TMEM151AQ8N4L1 468 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 GPATCH11Q8N954 259 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC22A17Q8WUG5 538 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 KCTD4Q8WVF5 259 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 MRPS31Q92665 395 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 ELMO2Q96JJ3 720 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SMIM14Q96QK8 99 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 TCF25Q9BQ70 676 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 FEM1AQ9BSK4 669 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SUDS3Q9H7L9 328 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 NMRAL1Q9HBL8 299 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 CPSF2Q9P2I0 782 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 HEY2Q9UBP5 337 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 OR51B4Q9Y5P0 310 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 A0A1W2PRU2 124 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC7A4O43246 635 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 PRLP01236 227 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SERPINE1P05121 402 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 CKMP06732 381 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SBK3P0C264 359 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC1A6P48664 564 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 TAS2R39P59534 338 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 RAB10P61026 200 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 GPM6BQ13491 265 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 FAM217AQ8IXS0 508 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 HJURPQ8NCD3 748 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 OR6P1Q8NGX9 317 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SPPL3Q8TCT6 385 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 DNAJC1Q96KC8 554 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 TBATAQ96M53 351 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 NDNQ99608 321 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 STK39Q9UEW8 545 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 SPO11Q9Y5K1 396 aa17.14■□□□□ 0.33
SHKBP1-216ENST00000598201 TMEM265A0A087WTH1 108 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 TMCC1O94876 653 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 LUC7L3O95232 432 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 ADH1AP07327 375 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 DNAJB1P25685 340 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 SERPINB3P29508 390 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 LEPRP48357 1165 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 ACVR1Q04771 509 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC12A1Q13621 1099 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 ITGA9Q13797 1035 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 TAF1BQ53T94 588 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 KIAA0408Q6ZU52 694 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 CRLF3Q8IUI8 442 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 CILP2Q8IUL8 1156 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 SPATA6LQ8N4H0 392 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 OR13C4Q8NGS5 318 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 OR6Y1Q8NGX8 325 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 BRSK1Q8TDC3 778 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 ALG14Q96F25 216 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 PRR11Q96HE9 360 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 OMDQ99983 421 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 MFSD1Q9H3U5 465 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 TASP1Q9H6P5 420 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC40A1Q9NP59 571 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 SCUBE2Q9NQ36 999 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 ANKRD6Q9Y2G4 727 aa17.13■□□□□ 0.33
SHKBP1-216ENST00000598201 TK2O00142 265 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 CCL16O15467 120 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 PDHA1P08559 390 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 T-ENOLP0DO92 83 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 RALBP11234 206 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 STMN1P16949 149 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 CSKP41240 450 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 GLRBP48167 497 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 PRAMEP78395 509 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 DLG1Q12959 904 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 SLC14A2Q15849 920 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 NAPRTQ6XQN6 538 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 ZNF783Q6ZMS7 281 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 CLNKQ7Z7G1 428 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 BBS7Q8IWZ6 715 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 CALML6Q8TD86 181 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 SORT1Q99523 831 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 CORO1BQ9BR76 489 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 TDRD1Q9BXT4 1180 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 SMG9Q9H0W8 520 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 TTYH1Q9H313 450 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 HCFC1R1Q9NWW0 138 aa17.12■□□□□ 0.33
SHKBP1-216ENST00000598201 ZFP69BQ9UJL9 534 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms