RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 KHNYNO15037 678 aaKnown RBP14.45□□□□□ -0.1
LIG1-208ENST00000595758 BCAT2O15382 392 aaPredicted RBP14.45□□□□□ -0.1
LIG1-208ENST00000595758 SLC31A1O15431 190 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 FGGP02679 453 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 ATP1A1P05023 1023 aaKnown RBP14.45□□□□□ -0.1
LIG1-208ENST00000595758 CFIP05156 583 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 DMDP11532 3685 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 TGM1P22735 817 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 NFKBIAP25963 317 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 CD68P34810 354 aaPredicted RBP14.45□□□□□ -0.1
LIG1-208ENST00000595758 FAM193AP78312 1265 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 SGCGQ13326 291 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 TMEM52BQ4KMG9 183 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 TMEM259Q4ZIN3 620 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 TRIM61Q5EBN2 209 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 ZSCAN30Q86W11 494 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 GPR161Q8N6U8 529 aaKnown RBP14.45□□□□□ -0.1
LIG1-208ENST00000595758 CXorf40AQ8TE69 158 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 MAIP1Q8WWC4 291 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 C1orf54Q8WWF1 131 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 ATG4AQ8WYN0 398 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 SERAC1Q96JX3 654 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 RBM15Q96T37 977 aaKnown RBP eCLIP14.45□□□□□ -0.1
LIG1-208ENST00000595758 WRAP53Q9BUR4 548 aaKnown RBP14.45□□□□□ -0.1
LIG1-208ENST00000595758 SLC17A9Q9BYT1 436 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 USP29Q9HBJ7 922 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 KCND1Q9NSA2 647 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 DNPEPQ9ULA0 475 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 DMTF1Q9Y222 760 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 CHKBQ9Y259 395 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 SLCO1B1Q9Y6L6 691 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 MYO15AQ9UKN7 3530 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 PATE3B3GLJ2 98 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 LIASO43766 372 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 FZD6O60353 706 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 MMP20O60882 483 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 PDHA1P08559 390 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 PRLRP16471 622 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 NFKB1P19838 968 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 MMP12P39900 470 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 EPHB1P54762 984 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 RPL26P61254 145 aaKnown RBP14.44□□□□□ -0.1
LIG1-208ENST00000595758 SEMG2Q02383 582 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 SF3A2Q15428 464 aaKnown RBP14.44□□□□□ -0.1
LIG1-208ENST00000595758 SLC14A2Q15849 920 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 LONRF2Q1L5Z9 754 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 ITPRIPL1Q6GPH6 555 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 TCEAL6Q6IPX3 200 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 SLC23A3Q6PIS1 610 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 DPPA4Q7L190 304 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 NDUFAF2Q8N183 169 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 FAM71DQ8N9W8 422 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 SPATA22Q8NHS9 363 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 PIH1D2Q8WWB5 315 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 TCEAL3Q969E4 200 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 FCRL5Q96RD9 977 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 C1QTNF2Q9BXJ5 285 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 TDRD1Q9BXT4 1180 aaKnown RBP14.44□□□□□ -0.1
LIG1-208ENST00000595758 PCDH9Q9HC56 1237 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 TM9SF3Q9HD45 589 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 RSPH14Q9UHP6 348 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 SLC6A14Q9UN76 642 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 RPL26L1Q9UNX3 145 aaKnown RBP14.44□□□□□ -0.1
LIG1-208ENST00000595758 ZNF292O60281 2723 aa14.44□□□□□ -0.1
LIG1-208ENST00000595758 TNRC6BQ9UPQ9 1833 aaKnown RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 CFAP69A5D8W1 941 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 C5orf60A6NFR6 353 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 PRAMEF26H0Y7S4 382 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 FOXD2O60548 495 aaPredicted RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 PMPCBO75439 489 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 PAK4O96013 591 aaPredicted RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 MT-CYBP00156 380 aaPredicted RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 PRLP01236 227 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 LIG3P49916 1009 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 AFF3P51826 1226 aaKnown RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 RACK1P63244 317 aaKnown RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 IRX4P78413 519 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 SIX1Q15475 284 aaPredicted RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 TEAD4Q15561 434 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 CCNG2Q16589 344 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 ANKRD20A2Q5SQ80 823 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 ANKRD20A1Q5TYW2 823 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 ANKRD20A3Q5VUR7 823 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 NAPEPLDQ6IQ20 393 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 USP45Q70EL2 814 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 C17orf53Q8N3J3 647 aaPredicted RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 C12orf50Q8NA57 414 aaPredicted RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 LPCAT1Q8NF37 534 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 CCDC110Q8TBZ0 833 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 ASB12Q8WXK4 309 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 TADA1Q96BN2 335 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 SCRN2Q96FV2 425 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 SLC6A18Q96N87 628 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 SPATA13Q96N96 652 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 WDR24Q96S15 920 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 OSBPL9Q96SU4 736 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 TMEM121Q9BTD3 319 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 NUSAP1Q9BXS6 441 aaKnown RBP14.43□□□□□ -0.1
LIG1-208ENST00000595758 ADGRE3Q9BY15 652 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 AASDHPPTQ9NRN7 309 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms